Pontivivens ytuae: I0K15_09110
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Entry
I0K15_09110 CDS
T06919
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
poz
Pontivivens ytuae
Brite
KEGG Orthology (KO) [BR:
poz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
poz03016
]
I0K15_09110
Enzymes [BR:
poz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
I0K15_09110
Transfer RNA biogenesis [BR:
poz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
I0K15_09110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QPH55860
UniProt:
A0A7S9LW70
LinkDB
All DBs
Position
complement(1860452..1861063)
Genome browser
AA seq
203 aa
AA seq
DB search
MANHLHKGDLPDGLDLGPVVAIDSETMGLNPHRDRLCVVQLSSGDGDAHLVQIAQDQTEA
PNLVRMLADPNVLKLFHYGRFDIAVLLHRFGVTTAPVWCTKIASKLVRTYTDRHGLKNLL
SELLAVDISKQQQSSDWGAAELTEAQMAYAASDVLYLHQLKEALELRLAREGRMEVAKAC
FDFLPTRAALDLAGWPEEDIFSH
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccatctgcacaagggcgacctgcccgacgggctcgacctcggcccggtggtg
gccatcgacagcgagacgatgggcctcaacccgcaccgcgaccggctctgcgtcgtgcag
ctttcctccggcgacggcgacgcgcatctcgtgcagatcgcgcaggaccagaccgaggcg
ccgaacctcgtccgtatgctcgccgatccgaacgtgctgaagctcttccactacggccgg
ttcgacatcgccgtcctgctccaccgcttcggcgtaaccaccgctccggtctggtgcacc
aagatcgcctcgaagctggtgcgcacctataccgaccggcacgggctgaagaacctgctc
tccgaactgctggccgtcgacatctcgaagcagcagcagtcgagcgattggggtgccgcg
gagcttaccgaggcgcagatggcctatgccgcctccgacgtgctctacctccaccagctc
aaggaggcgctggagctgcggctcgcccgcgaggggcggatggaggtggcgaaggcctgc
ttcgacttcctgccgacgcgcgcggcgctcgacctcgccgggtggcctgaagaggacatc
ttctcgcactga
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