Komagataella phaffii: PAS_chr3_0605
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Entry
PAS_chr3_0605 CDS
T01092
Name
(RefSeq) Ubiquitin carboxyl-terminal hydrolase
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppa01002
]
PAS_chr3_0605
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppa04121
]
PAS_chr3_0605
Enzymes [BR:
ppa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
PAS_chr3_0605
Peptidases and inhibitors [BR:
ppa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
PAS_chr3_0605
Ubiquitin system [BR:
ppa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
PAS_chr3_0605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
USP7_C2
Motif
Other DBs
NCBI-GeneID:
8199808
NCBI-ProteinID:
XP_002492831
UniProt:
C4R516
LinkDB
All DBs
Position
3:complement(join(1140738..1140745,1140796..1144228))
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AA seq
1146 aa
AA seq
DB search
MSTGVSQERNIDETDSDLNSGAQKSQYESIILQRQVVQKMLDTYTMKEGDVFCLVPKDWY
QRFFTFTYDPTDNEIFLKIGIINIAELLDANGLVKKPDGEDFVEYEILPYTVFQQLVSWY
GLFSGLQPIQRIVIARKDGELELEVYPCYFRLHLMDNERNSLDINNFILSRYSTIRDLKY
HATERFNTEFYHSRLWLVDDPNISNLPLTITVSSFEKIKFKKLLVEKIEDFDKTLEEAGL
NSCHLVVEYKLKKDSEWPSDITCKPAKLSTGLVGLTNLGNTCYMNSALQCLMHIPELSNY
FLYDFYKEEINVDNPLGNGGRLAIAFGSLIHTTLGPKKQIVTYATPKDFKLTLGRFNSMF
LGYHQQDSQELLAFLLDGLHEDLNRILKKPYLDKPELKDHLVQDKEAVRQLAEDCWSQHK
MRNDSIITDLFVGLYKSTLVCPVCQKISITFDPFNDLTLPLPVDKKWYHQIIFFPETGYP
KALDVELDKSSTFDHLKNYVSSKLQVPINDLIGADIFNSQFYKNFEANDPDLNYLPISDL
ISSGDKTVFYQVKHKPGDLVVPVFNTLSDDGGRYAKPFGLPFLITISEDESFSFGSIRDK
LERKYDQLSTLNYFDQIKQESKEIHKLADFPTLNKKYQNDSPNEDNSLSDVDCTSDISFA
NPKISGDFAFNIKLFDSSREFKPRYNLGARHIDIDENEDDSLWLPQTNNSFGNLPILLDK
LCEKKRAFYTYKKFEAEEELADEDDSESVNVNVEEVDENDNNLDTQQDESNDESMMGGMF
EESKNSAPVSPPCSEVATNTESNAFEPLIKTRQALVCEWEQDSFGKFFVGLGDDDDKSGT
QTWETPEVIPNEELIQNKKLIEEKLNKNIALQECLDIFSKPELLGENDLWYCPNCKDHRQ
ATKTIEIWKTPDILTIHLKRFENQRSFSDKIDAVVDFPIEALDMSEYVVNPETGDEIYDL
FAVDNHFGGLGGGHYTSYVKNHIDHKWYYFDDARVSAAEPEQAIKGSAYLLFYRRRSSTP
LGGEYLRQMMTQVREQEEVHREMENEILRDYVKLKEMQDAITAYEEKCQQVQVSEAVEST
LDEQQLECDSDRELENAGNVEADAESSQSINQVEKDQNEPSSMVSSANGAKRRKKQQNNL
LMSRLC
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgggtgtctcacaggagagaaatattgatgagacagactcggatcttaattcc
ggagctcaaaaatctcaatatgaaagtataatattgcaacgtcaagttgtgcagaagatg
ttggacacttacacgatgaaagaaggtgacgttttttgcttagtgcctaaagattggtat
caaaggtttttcacgttcacttatgatccaaccgacaacgaaatctttctcaaaattggg
atcattaatattgccgaattgctagatgctaatgggttagtaaagaagcctgacggcgaa
gattttgtggagtatgagatcctcccttacacagtctttcaacagttggtctcttggtac
gggttgttctctggtcttcaaccaattcagaggatagtgatagcccgtaaagacggagag
ttggaattagaagtgtatccttgctatttccgtttgcatttgatggataacgagcgcaac
tccctggacatcaacaacttcatcctatcaagatactccactatacgtgatctcaaatat
catgccacagaaagattcaacaccgagttctatcactctcgtttgtggttggtagacgat
cctaatatctccaatctacccttgacaattacggtgtcctcctttgagaagatcaaattc
aaaaagctactagtagagaaaatagaagactttgacaagactttagaagaagccggactg
aacagttgtcatcttgttgtggaatataagctgaagaaagattcagaatggccgtccgac
ataacctgtaaacctgcaaaattgagtaccggtttagtggggttaaccaatttgggtaac
acatgttatatgaattcagcacttcaatgtttgatgcatatacctgaactttcgaattat
tttctctatgatttttacaaagaggagatcaacgtcgataacccattgggtaacggaggg
cgcttggcaattgcatttggaagcttgattcatacaaccctaggtccaaagaagcaaatt
gttacctatgcaactcctaaggacttcaagctcacgctgggtcggttcaactcaatgttt
ttaggctatcatcagcaagattctcaagaactgctcgcattccttctcgatggattacac
gaagatctgaacagaattttaaagaaaccttatttggataagccagaattgaaagaccac
ctagtccaagataaagaagctgtccgacaacttgctgaagactgctggagtcaacacaaa
atgagaaatgactccataattacagacttattcgttggattatacaaatccactttggta
tgtccagtatgccaaaaaattagtattacatttgacccattcaatgatctcacactacct
cttcctgtagataagaagtggtatcatcaaattatattttttccagagacaggttacccc
aaggcgttggatgttgaactggataagtcatctactttcgatcatctgaaaaattacgtt
tcatccaagctgcaagtcccaatcaacgacctaattggtgctgatatatttaacagtcaa
ttttataagaactttgaggccaatgatccagatctgaattatcttccaatcagtgactta
atctcttcaggtgataagacagtattttatcaagtaaagcataagccaggagacttggtg
gttccagtctttaacactctttctgatgatggtggccgctatgcaaagccttttggcctt
ccatttcttatcacaatttccgaggatgaatcattttcctttggatctatcagagacaaa
ttggagagaaaatatgaccagttatcaacgcttaattacttcgaccaaatcaagcaggag
agtaaggaaatacacaagctcgctgattttcccacgttaaacaagaaataccaaaatgat
tcacccaacgaggataactctttatccgatgttgattgcacttcggacatatcgtttgcc
aatcctaagatctctggagattttgcttttaatatcaaactgttcgattcaagcagggag
ttcaaaccaaggtataaccttggtgccaggcacattgatatagatgagaatgaagacgat
agcttgtggcttccacaaaccaataacagctttggcaacctacctattttgcttgacaaa
ttgtgtgaaaagaaaagagctttttacacgtataaaaaatttgaggctgaggaagaactt
gcagatgaagatgactcggaaagtgttaatgtcaacgttgaagaggtcgacgaaaacgac
aacaacttagatacgcaacaagacgagtccaatgatgaatctatgatgggcggtatgttt
gaagagtcaaaaaattcagctcccgtttcacctccctgttctgaggttgctactaataca
gagtcaaatgcttttgagcctttgataaaaacaaggcaagccttagtctgcgagtgggag
caagattcctttggcaagttttttgttggtttaggagatgatgacgataaaagtggtact
caaacttgggaaactccggaagtaattccaaacgaagaacttattcaaaataagaagcta
attgaagagaaattgaacaagaacatagccttacaagaatgtttagacatattttccaaa
ccagaattattaggcgaaaacgatctatggtattgtccaaattgtaaagatcacaggcaa
gccaccaagactattgaaatctggaaaacaccagatatcctaacgatccacctcaagaga
tttgaaaatcagcgtagctttagtgataaaattgacgctgtagtggatttccccattgaa
gcattggatatgtcagaatatgtggtgaacccagagactggtgatgaaatttatgattta
tttgctgttgataatcattttgggggattgggaggtggccactacacttcatacgttaag
aatcatattgaccataaatggtactattttgatgatgcgagagtatcagctgcagaacct
gagcaggctattaaaggatcagcatatctattgttttacagaagaaggtcttcaactcca
ttaggaggggaataccttcgtcagatgatgacacaagtgagagaacaggaagaggttcat
agagaaatggagaatgaaatccttagagattatgtcaaattaaaagaaatgcaggatgct
ataaccgcttatgaagagaaatgtcaacaagtgcaggttagcgaggcagttgagagtact
ctggatgaacaacaactggaatgtgattccgatagagaattagaaaatgctggcaacgtt
gaggcagacgcagaatctagtcagtcgatcaatcaggtagagaaagaccaaaatgagccc
tcatcaatggtatcttcagcaaatggggctaaaaggaggaagaaacaacaaaacaatttg
ttaatgagtcgtctatgctga
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