Komagataella phaffii: PAS_chr3_0614
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Entry
PAS_chr3_0614 CDS
T01092
Name
(RefSeq) Component of the Sec23p-Sec24p heterodimeric complex of the COPII vesicle coat
KO
K14007
protein transport protein SEC24
Organism
ppa
Komagataella phaffii
Pathway
ppa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
PAS_chr3_0614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppa04131
]
PAS_chr3_0614
Membrane trafficking [BR:
ppa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
PAS_chr3_0614
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Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
8199639
NCBI-ProteinID:
XP_002492840
UniProt:
C4R525
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Position
3:1162845..1165727
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AA seq
960 aa
AA seq
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MSGKRRAYPSMQYPATEPVATGGSFGYGQQPGAQAYGQQFTPGAGIAGQQLPGATQPNLN
GQGAPYGAPGGDQLAQGMSSLNIQPNQQPQPVHQFPSQQQGYINPGAGLGVPPTQAAGPY
GVPAAVAPQQQSAQLGYAGPPYGNTYDQQQPQQAAFPFNQLYTADLLKELPPPISDLELP
PPPIVLPQGASLTGKPESNASPEYFRCTLNVIPNNNSLLKKSKLPLAVVVNPYQCLRDED
EPVPVVEDTLISRCRRCRSYINPLITFVDRNTKWRCNLCNLTNDVPSGFDFDKDTQQRVD
RMARVELNYSVVEFVAPKEYMVRLPQPLVYLFVLDVSTHAIQNGYLATVARTILDSLDQI
PNKDGRARVGFIGVDSSLHFFTIPQDSEDENDAQETSMLVVSDLDDVIVPAAENLLAPLQ
QSRQNIENLLNNFHSYFENNVNPNFALGPALKAGHRLINNIGGKMIVFTSTLPNKGIGAL
SIRDEEAHSGKAKESSALLSPNDSFYKSFAVECNKSQVTVDMFLASSSYQDVATLSNLPR
YTAGQTHFYPAWTAAREEDITKLSKEISNHLSMNINLEAVLRVRGSAGLRMNAFYGNFFN
RSSDLCSFPTFPRDQSYLIEISIDEHITKPLAAFQAAVLHTTSFGERRIRVMTLEVPIGK
ELNQIYASADQLAITNYFTHKAVEKALSSSLIDAREYLNRSLLDIFQVFKKELVAGNLGS
SSPLQLCNNLKMLPLLLHSLTKYIAFRPGKVPSDHRAYALNLLASSPIQRLIKFIYPTIY
SLHDMADECGLPEELEETYVNEAGEEVTEPIDGDIVLPEPINDTSTLLAPYGLYLIDSGT
DLFLYVGGESVPQLLLDVFGVDNPGYIKYGKSELPELNNEFNERLRNVINRVREGKDRIT
YQNLQIVIGQSKQRTGVPDRIQEDLTPLRLWCFSHLVEDRVGGGTAYREYLNQIREKLSS
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaaagagaagagcgtatccatcgatgcaatatcctgccaccgaacctgtggcc
acaggtggcagttttggatatggtcaacaaccaggcgctcaggcttatggacaacagttt
actccaggagctggaattgcgggtcagcaactaccgggagccactcaaccaaatttgaat
ggacagggagctccatatggtgcaccaggtggagatcagttagctcaaggcatgtcctct
ttgaatattcagccaaatcaacaaccccaacctgttcaccaattcccttcgcaacagcag
gggtatatcaatccgggtgctggtttgggtgtccctccaactcaggcagctggtccttat
ggtgtcccagctgccgttgctccacaacaacaatcagcccaacttggatacgcaggtcct
ccatatggaaacacgtatgatcaacagcaacctcagcaagctgcatttccgttcaatcaa
ctatatactgctgatcttttgaaggagctacctccaccaatatcagacttagagttgccg
ccgccaccaattgtcttacctcaaggagcttccttgacgggcaaacctgaatctaatgcc
agcccagaatacttcaggtgcacactaaatgtaatcccaaacaacaattcattactgaaa
aaatcgaagctgccccttgccgttgttgtaaacccatatcaatgtctcagagatgaggat
gagccagttcctgttgtcgaagacacgctcatatccagatgtcgtcgttgccgatcttat
atcaatcctttaatcacatttgttgatagaaacaccaaatggagatgcaatctttgtaat
ctaacaaacgatgttccatcaggatttgattttgacaaggatacccaacaacgtgttgat
agaatggccagagtcgaattgaactatagcgttgtggaatttgtggctccaaaggagtac
atggtgcgcttgccacagccattggtttacctatttgttttggatgtgagtactcatgcc
attcaaaatggctaccttgccaccgttgccagaactattttagactcacttgatcaaatt
ccaaacaaagacggacgtgcaagagtaggtttcattggtgtggactcttctttgcacttt
ttcacaattcctcaagattcagaggacgagaatgatgcgcaagaaacttcaatgttagtt
gtttctgacttggatgatgttatagttcctgcagcagagaatcttctggctcccttgcag
caatctcgtcagaatattgagaatttgctcaacaattttcacagttactttgagaataat
gtcaaccccaactttgcactaggtcctgcacttaaagctggtcatcgcttgattaacaac
atcggaggaaaaatgattgtattcacttccactttacctaataagggaattggagctctt
tctatcagagatgaggaagctcatagcggcaaggccaaggaatcaagtgcattactgtca
ccaaatgactcattttataagtccttcgctgttgagtgtaataagtctcaagtcaccgtg
gatatgtttttagcttcttcatcataccaagatgtggccactctgtccaacttgcctagg
tatacagcaggtcagacgcacttttatcctgcatggaccgctgccagagaggaagatatt
accaaactttcaaaggagatatctaatcatctgtcaatgaacatcaacttggaagctgta
ttaagggttagaggatctgcaggcttgaggatgaatgctttctacggaaacttcttcaac
aggtcttctgacttgtgttctttccctactttcccaagagatcagtcctatttgattgag
atcagcatcgatgagcacatcactaaacccttggccgctttccaagcggccgttttgcac
actacatcttttggtgaaagaagaatccgtgtgatgactctggaggttcctataggaaaa
gaactgaatcagatctatgccagtgcagaccaactggccatcacaaactacttcacccat
aaggctgtggagaaagctttatcgtcttcattaattgatgctcgggaatacttaaataga
tctcttcttgatattttccaagtattcaagaaagaattagttgcaggaaatctgggttcc
agctcccctcttcaattgtgcaacaacctgaaaatgttgcctttgctgttgcactcttta
acaaagtatattgctttccgtccaggtaaagtgcccagtgatcatcgtgcttatgctttg
aatttgttggcttcaagtccaattcaaagactgattaaatttatctatccaacgatttat
tcgcttcacgatatggctgatgaatgcggattgcctgaggagcttgaagaaacatacgtg
aatgaggctggagaagaggtaactgaacccatcgatggagacattgttctacctgagcct
attaatgacacatccacgttgttagctccttatggattatatctgatcgattcaggcacc
gacttgttcttatatgttggaggtgaatcggttccgcaattactattagatgtatttggt
gttgacaatccaggttacattaaatatggaaagagtgagctaccagaactgaacaacgag
ttcaacgaacgtcttagaaatgttattaatcgtgttagagaaggcaaagataggattacc
taccagaacttgcaaattgtcatcggtcaaagtaagcaaagaacgggcgtaccagatagg
attcaagaggacctcactccgttacgcttatggtgtttcagccatcttgtggaggaccgc
gttggaggcggtactgcttacagagagtacctaaaccaaatccgtgaaaaactgtcttct
taa
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