Komagataella phaffii: PAS_chr3_0972
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Entry
PAS_chr3_0972 CDS
T01092
Name
(RefSeq) Cytoplasmic mRNA cap binding protein
KO
K03259
translation initiation factor 4E
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppa03019
]
PAS_chr3_0972
03012 Translation factors [BR:
ppa03012
]
PAS_chr3_0972
Messenger RNA biogenesis [BR:
ppa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
PAS_chr3_0972
mRNA cycle factors
Common to processing body (P body) and stress granule
PAS_chr3_0972
Translation factors [BR:
ppa03012
]
Eukaryotic type
Initiation factors
eIF-4
PAS_chr3_0972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IF4E
Motif
Other DBs
NCBI-GeneID:
8199719
NCBI-ProteinID:
XP_002493215
UniProt:
C4R650
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All DBs
Position
3:1886742..1887350
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AA seq
202 aa
AA seq
DB search
MSETENAPHEKSLLDDQVDFTVKHPLNSEWTLWYTKPAVHEQESWSDLLRPIISFNSVEE
FWGIFNSIPKASDLPVKSDYHLFRDGIKPEWEDERNANGGKLTYQFAYRKVDINELWSRG
LLSVIGETIQDDDGETEVNGIVLSIRRAALKIALWTKSKDEAVLRPIGERFKKVLKLTAR
DHIDFQPHKSGAGSKNVPSFSI
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagactgaaaacgctcctcacgaaaagtcactgcttgacgaccaagttgatttc
actgttaagcatccgctcaactctgagtggacactatggtatacgaagccagccgttcat
gaacaagaaagttggtcagatttgctacgtcctatcatttcattcaactcggtagaggag
ttctggggaatcttcaactccattccaaaggcctccgatttgccagtcaagtcggactat
catctttttagagatggaatcaaacctgaatgggaagacgagcgcaatgctaacggagga
aaactgacataccagtttgcctacagaaaggttgatatcaatgaattgtggtctcgcggt
ctgttgagtgtgattggtgaaacgattcaggatgatgacggagaaactgaggtgaacggt
attgttctgagcattcgtcgtgccgctttgaagattgccctctggaccaagtccaaggat
gaggcagttttgagaccaattggcgagagattcaagaaagttttgaagttgacagcccgt
gatcatattgactttcaacctcataagagtggtgctggtagcaagaacgtaccttctttc
agcatttag
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