Komagataella phaffii: PAS_chr4_0022
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Entry
PAS_chr4_0022 CDS
T01092
Name
(RefSeq) Ubiquitin-specific protease that may play a role in ubiquitin precursor processing
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
ppa
Komagataella phaffii
Pathway
ppa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
PAS_chr4_0022
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppa01002
]
PAS_chr4_0022
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppa04121
]
PAS_chr4_0022
Enzymes [BR:
ppa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
PAS_chr4_0022
Peptidases and inhibitors [BR:
ppa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
PAS_chr4_0022
Ubiquitin system [BR:
ppa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
PAS_chr4_0022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP7_ICP0_bdg
USP7_C2
UCH_1
Arf
Motif
Other DBs
NCBI-GeneID:
8201315
NCBI-ProteinID:
XP_002493428
UniProt:
C4R6M4
LinkDB
All DBs
Position
4:50272..53898
Genome browser
AA seq
1208 aa
AA seq
DB search
MEESIPTPPLEEMEVSGMDSSASQSPNPVDVIQHDSSNFEAVKEHVLPPVPPDYEVEFEG
YFTWNIQDWRKLSDSKIVSPRFVLGNYKWNLLIFLKRANNGTNIGIYLEPHPLDDDQEQD
PNWYVCAQFAIDLWNPEYPYIHKSNASYHRFNQDVTDWGFSTFLELRNLHRASKSYDKPF
LFDNKLNITVYVRVIKDHTGVLWHSFVNYDSKKETGLVGLNNQGATCYLNSLLQSYYFTN
IFRKKVYAIPTDDEAKNEQISEETISVSLALQRVFYQLQKSNLPVDTTELTRSFGWDTNE
AFIQNDVQEMNRLLMEKLENKMKGTSIEGCLNDIFVGKMKSFIRCIHVDYESSRIEDFWD
IQLNVKNMGSLQNSFENYIELETLSGENKYDASGFGLQDAEKGVVFESFPPVLHLQLKRF
EYDFVYDQLVKINDRHSFPDEIDLKPYLDSAGDAYDEDWVYSLHGVLVHTGDISTGHYYA
MIKPSIENTWYRFDDDKVWKVTRSQVFDENFGFDELQPDVVRSMTRSQFLDYQQKRHTSA
YMLVYIRKSQEKAVLEPVTDADVPSHIPEQIHKELEERDLLEKERREMHLYEHLKIITNQ
TFSKYEGFDLTPNVSDLNYYASDLFDEESYPLDVKLLKTEPLSKLYDLVSDSLGGVDPRH
FRFWHVSTRRNYTARPDGPVPLTYDTSKIPIGEVFKLNSGKKLVQQTFLFVEEVGKELNF
VSKKLLELNKQNPKLDSEINSNNKFEILKQRYSQIPSDTFPPFHSCDQDSILLFLKYFDP
KSQNLQGLTHVVVNKDAKVSTLTKSVNYFMGFDLETPLNFYEEIEPKSIEPIILEISFAE
SELLNGDIICFTRADTESDGSIKENIDGYGSVITYYNFLESRIHLFVRPALLDSYLNEED
EKNLESKTFHVWVPSQIPYDCLVARFAKEIKTDPDYLRLYGVNHDDTRIAIHRNTRLRDI
LPRSVKPSQTITFEYEILDITLAEFESLVPIEVYWFNNSVLHLQKYELLISKQESIFDLL
GKLQYKIGFNDEVREGILAWTSVDHKFGTLVADENIVSLVLRESTNHIFVGSFPHLKKIL
TTTDENQVLELDDVEIIRGDIREVPVFQFRNEIHRKHGAPFIFDVRRNERFKDTKNRFQR
LLGLGDKEFTKTELVIVSNSIDQQIRYVTDESLLLYDELAEHEQLAIDTPPRAVRRPTIQ
ERALFIKD
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtcaattcctacgccaccactggaagaaatggaggtttctggcatggactca
agtgctagtcagtctcctaatccggttgatgtgatccaacatgactccagcaatttcgaa
gcggtcaaggagcatgttcttccgccagtcccacctgactatgaggttgagtttgaaggc
tatttcacctggaatatacaggactggaggaaactgtctgattccaagattgtaagcccc
cgatttgtgctaggaaattacaaatggaacctgctaatatttctcaagagagctaataat
ggcaccaatattggaatctacctggaacctcacccccttgatgacgatcaagagcaggac
ccgaattggtacgtttgcgctcagtttgcaattgatttgtggaaccccgagtacccttat
atacacaaatcgaatgcttcttaccacagattcaaccaagatgtgaccgattggggattt
agcaccttccttgaacttagaaatttacatcgtgctagcaagtcatatgataagccgttt
ttattcgataataagctcaatatcacagtctatgtgagagtaatcaaagaccacaccgga
gttctgtggcatagttttgtgaattatgatagtaagaaggaaactggcttggtgggcttg
aataaccaaggagctacttgttatttgaactcacttctacagtcatactattttacaaat
atcttccgtaaaaaagtttatgctattccaacggatgatgaggcaaagaacgagcaaatc
agtgaagagaccatcagtgtttctctagcgctacaacgagtcttctatcagcttcaaaaa
tcaaaccttccagttgacacaaccgaactaaccaggtcgtttggatgggatactaatgaa
gctttcattcaaaacgatgttcaggaaatgaatcgtcttttaatggaaaaattagagaat
aaaatgaaggggacttccattgaaggatgtttgaatgatattttcgttggcaagatgaaa
agttttattcgatgcattcacgtcgactatgagagtagcaggatagaagatttttgggat
atacagttgaacgtcaagaacatgggttctttacaaaactcttttgagaactacattgaa
ctggagacgttgagcggcgaaaataaatacgacgcctctggttttggccttcaggacgcc
gagaaaggtgttgtatttgaaagcttcccaccagttttgcatttgcaattaaaaagattc
gaatacgactttgtctacgatcagttagttaaaataaacgatcgccactccttccctgat
gaaattgacctcaagccgtatttggatagtgctggtgatgcttatgatgaggattgggtc
tattctttacatggtgtacttgttcacacaggagatatttctacgggccactactacgct
atgattaagccaagtattgaaaacacctggtacagatttgatgatgacaaagtctggaaa
gtaactaggagccaggtgtttgacgaaaattttggctttgacgagcttcagccggatgtg
gttagatcaatgactagatctcagtttttggattaccaacagaaacgtcatacgtctgca
tatatgcttgtctacattaggaagagccaagagaaagcagttctagaaccagtgacagac
gcagacgttccatcgcacattcctgagcagatccacaaagaattagaggagcgtgacctt
ttggaaaaagaaagaagggagatgcacttgtatgagcatctgaagattatcaccaaccag
acattctccaagtatgagggctttgatttgaccccgaatgtttcggacttgaactattat
gctagtgacttgtttgacgaagaatcttacccactagacgttaagctactgaaaaccgaa
cctttgtcgaagttatatgatctggtatcagattctttgggaggagtggatcccagacat
tttagattctggcatgtatccacgcgacgaaattatacagcaagacctgatggtccggtt
ccactgacttatgatacttctaaaataccaattggcgaggtatttaaactgaattctggt
aagaagctagttcaacagacattcttgtttgtggaagaagtcggcaaagagcttaatttt
gtctccaagaaacttctggaactaaataagcaaaacccaaagcttgattctgagatcaat
tccaacaacaagtttgaaattctcaagcaaaggtattctcagatccctagtgatactttt
cctccttttcatagctgcgaccaagattcgattcttttatttctgaagtactttgacccc
aagtcccaaaatttgcaaggtttgactcatgtcgtcgtgaacaaggatgccaaggtgtct
acattgaccaaatctgtcaattattttatgggatttgatttagagactccgttaaacttt
tacgaagaaattgagccgaaatctattgaaccaatcatccttgaaatttcgtttgctgag
tcagagctattgaatggagatatcatttgtttcacgcgggccgacaccgaatctgatgga
tcaatcaaggagaatatagatggttatggatctgttattacctactacaactttttggaa
tctagaattcatctgtttgtgagaccggctctactggattcctacttgaacgaagaggat
gagaaaaatttggagtccaagacattccatgtatgggttccctctcaaattccttatgac
tgtcttgttgccagatttgcaaaagaaatcaaaactgatcccgactatttacgcctgtat
ggagtgaaccatgatgatactagaatcgctatccataggaacacacggttgcgtgacatc
cttcctcgaagcgtcaaaccgtctcaaacaattacctttgagtatgagattttagatatc
actttggcggaatttgaaagtttggtcccaatcgaggtttattggttcaacaattcagtt
ctccacctacaaaagtatgagcttttaatatccaaacaggaatctatatttgatttgctg
ggcaagctacagtacaagatcggcttcaacgatgaagttcgggagggtattcttgcatgg
acttctgttgatcacaagttcggaaccttagtcgctgacgaaaatatagttagtttggtt
ctgcgagagagtaccaaccatatattcgttggctcctttcctcatctcaaaaagatcctc
accacaaccgacgagaaccaagttttggaacttgatgacgttgagatcatcagaggggat
atcagggaggttcctgtgttccaatttaggaatgaaattcatcgtaaacatggcgcgcct
ttcatctttgatgttagaagaaatgagagattcaaagatactaagaatagatttcaacga
ctgttgggattaggagacaaagaatttacgaagacagagcttgtaatagtctctaattcc
atagaccaacagatacgttatgtgacggatgaatcactcttactttatgatgaactggca
gaacatgaacaacttgccattgacacaccaccaagggctgtcagacgtccaactatccaa
gaacgagcgctattcattaaagattag
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