Komagataella phaffii: PAS_chr4_0263
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Entry
PAS_chr4_0263 CDS
T01092
Name
(RefSeq) Karyopherin beta, forms a dimeric complex with Srp1p (Kap60p)
KO
K14293
importin subunit beta-1
Organism
ppa
Komagataella phaffii
Pathway
ppa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PAS_chr4_0263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppa03009
]
PAS_chr4_0263
03036 Chromosome and associated proteins [BR:
ppa03036
]
PAS_chr4_0263
Ribosome biogenesis [BR:
ppa03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
PAS_chr4_0263
Pre-60S particles
PAS_chr4_0263
Chromosome and associated proteins [BR:
ppa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
PAS_chr4_0263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_2
IBN_N
Arm
TIP120
Vac14_Fab1_bd
CEP104-like_TOG
Cnd1
DUF6285
V4R
Motif
Other DBs
NCBI-GeneID:
8200932
NCBI-ProteinID:
XP_002493676
UniProt:
C4R7C2
LinkDB
All DBs
Position
4:531660..534272
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AA seq
870 aa
AA seq
DB search
MSDINISQVLQNAILATDANKRSEAENQLNGLLNSNFHEYLRLLTNTLADENERTEVRML
AGLGLKNQLTAKDERTKQARANRWIELETEAKKQIKETALKALLTEDTRVANSVAQLVAA
IADIELPRSEWPELMSIIVENTKADKPVNVKRASLLTIGYICETADPLNAGVVSQANGIL
IAIVQGAQASEPSKIVRLTAINALVNSLEFIRYNFEREGERNFIMQVVCETTQADDPELQ
ASAFGALAKIMSLYYPYMSVYMERALYGLTVSGMQSSNEKVACMAVEFWSTVCEEELEIA
LQKEEYAETGTAAEDLTSYNFALVAIQDVLPTLLTLLTRQNEDAEDDSWSVAMAAGACLQ
LFAQNTGNYVVQPTLQFVEGNLTGPTWRNKEAAVMAFGSILDGPDREQLKVLISQALQPI
LQLMQDESLHVKETVAWCLGRIADLVIDAIDINQHLPAVIQAVVQGLADHPKVSTNCCWT
LINLMEQLCANGSQLETTPMSQYYETLVPTLIKLSGSEENEYSARTSAYETLATLVYYSS
NDVMPIVNQVASEVLNRLEATIQMQQHVETAEEKANLEELQSSILSLLTNVIRRAGLEVS
AVSDNLMELFLRLLQAQENNALIEEDIFIAISSIATAIEKGFVKYMDAFLPFLVAALQNI
ESPVCNTAIGLIADISHSLGDGILPYVPNLINILGAALMNQNIKRDLRPIILSCFGDIAS
SIGEHFLPYLEVVMNICASAQSLQVEDGSIENLDYILTVRESVLDAYVGIIGGLHSHPEA
IFPYTQQVMDFLLSVYSDINMSSSDTVSRSAVGILGDLALMFPNGEIKQIYTQDWVTQFI
KSTRSNPSFQQSTKDTARWAREQQKKQLSL
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacatcaacatttcacaagttctccagaacgcaatcttggctacggatgcaaac
aagcgttccgaagcagagaatcaacttaatgggcttctcaacagtaatttccatgaatat
ttaagacttttaaccaacacgttggcggacgagaatgaacgaactgaagttcgaatgctc
gctggtttgggcttgaagaaccagctgactgccaaggatgaaaggaccaagcaagccaga
gctaaccgttggatagagttggagactgaagctaagaagcaaatcaaagaaaccgcatta
aaggctcttttgacggaggataccagagtggccaactccgtggctcagttggtagctgct
attgctgatatcgagttacctagatctgaatggccagagctcatgtcaattatagtagaa
aacacaaaggctgacaaaccagtgaacgttaaacgtgcctccttattgaccattggttac
atctgtgagacagcagacccgttaaatgctggtgtagtgtcccaggctaatggaatttta
attgccattgttcaaggtgctcaagcctctgaaccttcgaagatagtacgtttaaccgcc
ataaatgctttagtgaactccttggagtttatcagatataattttgaaagagagggagaa
agaaactttatcatgcaagtagtctgcgaaactacccaggcagatgatccagagttacaa
gcgagtgcatttggtgctcttgccaaaatcatgagtttatattacccgtatatgagcgtt
tacatggaacgagcgttatatggattgacagtttctggtatgcagagttctaacgaaaaa
gtcgcctgtatggccgtggaattttggagcactgtctgtgaagaggagctagaaattgcc
ttacaaaaggaagagtatgccgaaactggtactgcggcagaagacctgacatcctacaac
tttgcattggtggcaatccaagatgttctgccaaccctcctgacactactcacaagacaa
aatgaagacgcagaagacgatagttggtctgttgcaatggctgcaggtgcttgtttgcag
ctctttgctcagaataccggaaactatgttgtccagccaacgcttcaatttgtcgaggga
aacctaactggccctacgtggaggaataaggaagcagctgttatggcttttgggtcgatc
ttagatggtcctgatagagagcagttgaaggttttgatctcacaggcccttcagccaatc
ctgcagcttatgcaagatgaatcattgcatgtcaaggaaactgtagcatggtgcttagga
agaattgcagacctggtcattgatgccattgatatcaatcaacatttgccagccgttatt
caagcggtcgtacaaggattggctgaccatcccaaagtttcaaccaactgctgttggact
ttgattaatttgatggaacaactgtgtgcaaacggatcgcaattggaaactacaccaatg
tcgcaatattatgaaactctagttccaacacttatcaaattgtctggttcggaagagaat
gagtactctgctcgtacctctgcatatgaaaccctagcgacccttgtgtattacagttcc
aatgatgtcatgcccatagtaaaccaggttgcgtcagaggttttgaacagattggaagcc
accattcaaatgcaacagcatgtggaaactgccgaggaaaaggcaaacttggaagaactc
caaagtagcattctaagtctcctgaccaacgtcatccgtcgggcaggactagaagtaagc
gctgtatctgacaatttgatggaattgtttttaagactgttgcaagcgcaagaaaacaat
gctctgattgaggaggacattttcatagccatttcatccattgccacggcaatagagaag
ggctttgtgaaatacatggatgcatttttgcctttcctggtagctgcgttacagaatatt
gagtctccagtttgtaatacggctattggattgattgctgatatctcacattcactcggt
gatggaatccttccatatgttcctaacctgattaatattttgggagctgctcttatgaat
caaaacatcaaaagagatttaagacctataatattgtcatgttttggagacattgcatcg
tctattggtgaacactttttaccatatctggaagtggtgatgaacatttgcgcaagcgct
caatctctgcaggtagaagatggttcaattgaaaatttggactacatccttaccgtgaga
gagtccgtattggacgcgtacgtcggcattattggaggattgcattcacatccagaagcc
attttcccctacacccagcaggtgatggactttttattatcagtttattcggatataaac
atgtcttcttctgacaccgttagtcgatctgcagtgggtattctaggtgatcttgctttg
atgttccctaatggggaaatcaaacaaatttacacgcaagattgggtgacacagtttata
aagagcacgaggtcaaatccttctttccaacagtctaccaaggacactgccagatgggcc
agagaacagcagaaaaagcagttgtctctataa
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