Pseudomonas paraeruginosa: B7D75_12845
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Entry
B7D75_12845 CDS
T08722
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppaa
Pseudomonas paraeruginosa
Pathway
ppaa02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B7D75_12845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppaa03021
]
B7D75_12845
Transcription machinery [BR:
ppaa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B7D75_12845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_28
GerE
HTH_29
HTH_38
HTH_36
HTH_24
HTH_11
DUF6362
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AVR67790
LinkDB
All DBs
Position
2651991..2652509
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AA seq
172 aa
AA seq
DB search
MSVPTLIDAHHRAMHALYSEHHGWLQNWLRGKLGSAADAADLAQDTFLRILLKRELREIG
MPRAFLRTIARGLVIDHWRREELQRAYLESIAHLPEAQAPSPEARELVLELLEEISRMLD
GLKPKVRTAFLLAQCEDLGYRQIAERMGVSQRSVERYVAEALYHCYLLRYGE
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcccgaccctcatcgacgcccaccaccgcgccatgcatgcgctgtacagcgaa
catcacggctggctgcagaactggctgcgcggcaagctgggcagcgcggcggacgcggcg
gacctggcccaggacaccttcctgcgcatcctgctcaagcgcgagctgcgcgagatcggc
atgccgcgcgcgttcctgcgcaccatcgcccgcggcctggtgatcgaccactggcgccgc
gaggaactgcagcgcgcctacctggaaagcatcgcccacctgcccgaggcgcaggcgcca
tcgcccgaggcgcgggaactggtgctggagctgctggaggaaatctcgcggatgctcgac
gggctcaagccgaaggtccgcaccgccttcctcctcgcccagtgcgaggacctcggctac
cggcagatcgccgaacgcatgggcgtttcccagcgcagcgtcgagcgctacgtggccgag
gcgctgtaccactgctacctgctgcgctacggcgaatga
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