Palaeococcus pacificus: PAP_00750
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Entry
PAP_00750 CDS
T03210
Name
(GenBank) radical SAM protein
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
ppac
Palaeococcus pacificus
Brite
KEGG Orthology (KO) [BR:
ppac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppac03016
]
PAP_00750
Enzymes [BR:
ppac01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
PAP_00750
Transfer RNA biogenesis [BR:
ppac03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
PAP_00750
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wyosine_form
Radical_SAM
Fer4_12
Hydrolase
HAD_2
Motif
Other DBs
NCBI-ProteinID:
AIF68593
UniProt:
A0A075LVY4
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All DBs
Position
complement(142259..143239)
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AA seq
326 aa
AA seq
DB search
MSDARYNMPEEIANLFKKQHYALVGRHSGVKLCHWLKESIKHNRVCYKQKFYGIQSHRCL
QMTPVLAWCTHNCIFCWRPMEGFLGIELPEPWDDPAALIDESIKAQRKLLSGYGGIKDQI
NARKLDEAMEPKHAAISLSGEPMLYPKIGELVEEFHKRGITTFIVTNGTEPERLEEMIKE
NKLPTQFYVSLTAPDEETYNKVNVPMIPDGWEKINKTLELMNGLPTRTVIRLTLVKGENM
HNPEGYAELIMKARPMFVEAKAYMFVGYSRNRLTINNMPKHAEIKAFAEELVKHLPGYHI
EDEYEPSRVVLIMRDDISKEERFIKL
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgcgagatataatatgcctgaggaaattgctaatttatttaaaaagcagcat
tacgctctcgttggaagacacagtggagttaagctttgccattggttaaaggagagtata
aagcacaaccgtgtttgctacaagcagaagttttatgggattcaatcccaccgctgcctc
caaatgacacccgtgctagcctggtgtactcacaactgcattttctgctggcgccctatg
gaaggctttttgggtattgaactccctgagccatgggatgatccggccgccctcatagat
gagagcataaaagcacagagaaagctcttaagcggatatggtggaataaaagatcaaata
aatgccagaaagcttgatgaagcgatggaaccaaaacatgctgccatcagcctgtccggc
gagccaatgctctacccaaagataggcgaattggtagaggagttccacaagaggggcata
actacgttcatagttacaaatggaactgaaccagagcgtttagaggagatgatcaaggaa
aacaagctaccaacacagttctatgtctcactcaccgccccagatgaggagacatacaac
aaagtgaatgttccgatgatccccgacggatgggaaaagataaacaaaaccctcgaatta
atgaatggcttgccaacaagaaccgtcattaggcttactctcgttaaaggcgagaacatg
cacaacccagaaggatacgcagagctgattatgaaagcaagaccaatgttcgtcgaggca
aaagcatacatgtttgtggggtattcaaggaacagactcactataaacaatatgcccaaa
catgcagaaataaaagcttttgcggaagaactagtcaaacaccttccaggatatcacata
gaggatgaatatgagccaagcagggtagttttaataatgagggatgatatcagcaaagaa
gagcgtttcataaagctgtga
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