Pseudomonas palleroniana: LDL65_12665
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Entry
LDL65_12665 CDS
T09728
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ppae
Pseudomonas palleroniana
Pathway
ppae00521
Streptomycin biosynthesis
ppae00523
Polyketide sugar unit biosynthesis
ppae00541
O-Antigen nucleotide sugar biosynthesis
ppae01100
Metabolic pathways
ppae01110
Biosynthesis of secondary metabolites
ppae01250
Biosynthesis of nucleotide sugars
Module
ppae_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LDL65_12665 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LDL65_12665 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LDL65_12665 (rfbC)
Enzymes [BR:
ppae01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LDL65_12665 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UOP13363
LinkDB
All DBs
Position
complement(2743973..2744518)
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AA seq
181 aa
AA seq
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MNVTATELPGVLIIEPKVFGDDRGFFYESFNARHFEQATGLQQQFVQDNHSRSQKGVLRG
LHYQVEHAQGKLVRVTAGEVLDVAVDIRRSSPNFGKWASVRLSAGNSRQLWIPPGFAHGF
VVLSDYAEFLYKTTDYYTPAAERCISWNDPTLNIDWQLDGPPILSAKDQNGKSFKDADVF
S
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaaccgcgactgaattgcccggtgtattgatcatcgaaccgaaggtttttggc
gatgatcgcggttttttctatgaaagtttcaacgcccggcattttgaacaagccaccggg
ttgcaacagcagtttgtgcaggacaaccactcacgctcgcaaaagggcgtgttgcggggc
ctgcactatcaggtcgagcacgcccagggcaaactggtgcgtgtgacagccggtgaggtt
ctggacgtggcggtggatatccgccgcagttcgcccaacttcggcaaatgggccagcgtg
cgcctgtctgccggcaatagtcgccaactgtggattccaccggggttcgcccatggtttt
gtggtactcagtgattacgccgagttcctctacaaaaccaccgactattacacgccggca
gccgaacgttgcatcagttggaacgaccccacgctcaacattgactggcaactcgatggc
ccgccgatcctgtccgccaaagaccagaacggcaagagtttcaaagacgcggacgtgttc
tcgtga
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