Pseudomonas palleroniana: LDL65_18010
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Entry
LDL65_18010 CDS
T09728
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
ppae
Pseudomonas palleroniana
Pathway
ppae01501
beta-Lactam resistance
ppae01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ppae00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LDL65_18010
01503 Cationic antimicrobial peptide (CAMP) resistance
LDL65_18010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppae02000
]
LDL65_18010
01504 Antimicrobial resistance genes [BR:
ppae01504
]
LDL65_18010
Transporters [BR:
ppae02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LDL65_18010
Antimicrobial resistance genes [BR:
ppae01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LDL65_18010
BRITE hierarchy
Motif
Pfam:
ACR_tran
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
UOP08988
LinkDB
All DBs
Position
complement(3926117..3929278)
Genome browser
AA seq
1053 aa
AA seq
DB search
MSKFFIDRPIFAWVIALVIMLVGALSILKLPINQYPAIAPTAIDIQVTYPGASAQTVQDT
VVQVIEQQLNGIDNLRYVASDSNSDGSMTITATFNQGTNPDIAQVQVQNKLNLATPLLPQ
EVQQQGIRVTKSVKNFLMVIGLVSEDGSMTKDDLSNYIVSNIQDPISRTAGVGDFQVFGS
QYAMRIWLDPAKLNNYQLTPVDVSNAISAQNVQVATGQLGGLPALPGTQLNATIIGKTRL
QSAEEFAKILMKVNADGSQVRLGDVARIELGGQNYSISAQFNGKPASGMAIKLAAGANAL
DTGKAIRATVASLEPFFPPGMKAVVPYDTTPVVTESISGVVDTLVEAIVLVFLVMFLFLQ
NFRATIITTMTVPVVLLGTFGILAAAGFTINTLTMFGMILAIGLLVDDAIVVVENVERVM
AEEHLSPKEATVKSMGQIQGALVGIALVLSAVLLPMAFFGGSTGVIYRQFSITIVSAMAL
SVLVALIFTPALCATMLKPIDPEKHGQPKRGFFGWFNRTFDRGVQKYERGVGGMIKHKIP
AFLVYALILAGMIWMFTRIPSAFLPEEDQGVIFAQVQTPVGSSAERTQKVIDDMRAFLLN
DKEGEPGEGKAVKSVFTVNGFNFAGRGQSSGLAFVMLKPWGERDASQSVFEVAKRAQGYF
FGAFKDAMVFAIVPPSVLELGNATGFDVFLQDQGGVGHQKLMDARNQFLGAAAQSKILAG
VRPNGVNDEPQYELTVDDEKASAQGISLSEIQQTLAIALGGSYVNDFIDRGRVKKVYVQG
DAASRMSPEDLDKWYVRSTSGKMVPLSAISSGKWIYGSPKLSRYNGVAAMEILGTPAPGY
STGDAMAEVERIAKSLPAGVGYSWTGLSYEERLSGSQAPALYALSLLVVFLCLAALYESW
SIPIAVILVVPLGVIGALIATSLRGLSNDVFFQVGLLVTVGLAAKNAILIVEFAKELHEQ
GKGIVEAAIEASRMRLRPIIMTSMAFMLGVLPLAISTGAGSGSQHAIGTGVIGGMITATV
LAIFWVPLFYATVSSAGERKKPVAIETPKEAGQ
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaattttttatcgaccgtcccatttttgcctgggtaatcgccctggtgatcatg
ctggtcggggcactgtcgatcctgaagttgcccatcaaccaatacccggccatcgcgcca
accgccatcgacatccaggtgacctacccaggcgcgtccgcacaaaccgtgcaggacacc
gtggtgcaggtcatcgagcaacagctcaatggtatcgacaacctgcgttatgtcgcctcg
gacagtaactccgacggcagcatgaccatcaccgcgacgttcaaccagggtaccaacccg
gacatcgcccaggttcaggtgcagaacaagctgaacctggcgaccccattgctgccgcaa
gaagtgcagcagcagggtatccgcgtgaccaagtcggtgaagaacttcctgatggtgatc
ggtctggtgtcggaagacggcagcatgaccaaggacgacctgtccaactacatcgtttcc
aacatccaggacccgatttcccggaccgccggtgtgggtgacttccaggtgttcggttcg
caatacgccatgcgtatctggctcgacccggccaagctgaacaactaccagctcacgccg
gtagacgtcagcaacgccatctcggcccagaacgtccaggtcgcgaccggccagttgggc
ggcctgcctgccctgcccggcacccagctgaacgccaccatcatcggcaagacccgtctg
caaagcgccgaagagtttgccaagatcctgatgaaggtgaacgccgacggctcgcaggtt
cgcctgggcgacgtggctcgtatcgagctgggtggccagaactacagcatcagtgcacag
ttcaacggcaagccggcctcgggtatggccatcaagctggcagccggcgccaacgccctg
gacaccggcaaggcgatccgtgccaccgtggcctccctggaaccgttcttcccgccaggc
atgaaggcggtggtgccgtatgacaccaccccggtggtgaccgagtcgatctccggggta
gtcgacaccctggtcgaagcgatcgtgctggtgttcctggtgatgttcctgttcctgcag
aacttccgcgccaccatcatcaccaccatgacggtaccggtggtattgctgggtaccttc
ggcatcctcgcggcagccggcttcaccatcaacaccctgaccatgttcggcatgatcctg
gccatcggcttgctggtggacgatgccatcgtcgtggtggaaaacgtcgaacgggtcatg
gccgaggaacacctctcgcccaaagaagcgacggtcaagtccatgggccagatccagggt
gccctggtgggtattgccctggtattgtcggcggtactcttgccgatggccttcttcggt
ggttccaccggtgtgatctaccgacagttctccatcaccattgtttcggcgatggcgttg
tcggtactggttgccctgatctttaccccggccttgtgcgccaccatgctcaagccgatc
gacccggaaaaacacggccaacccaagcgcggcttcttcggctggttcaaccgcaccttt
gatcgcggcgttcagaagtacgagcgcggcgtgggcggcatgatcaagcacaagattcca
gcgttcctggtgtatgcgctgatcctggccggcatgatctggatgttcacccgtattcca
agcgcgttcctgcctgaggaagaccagggtgtgatctttgcccaggtgcagacgccggtc
ggttcgtcagctgaacgtacgcaaaaagtcatcgacgacatgcgtgccttcctgctcaac
gacaaggaaggcgagccgggcgaaggcaaggccgtgaagtcggtatttaccgtgaacggc
ttcaacttcgccggccgtggccagagctcgggccttgcgttcgtgatgctcaagccatgg
ggcgagcgagatgcttcgcaatcggtgttcgaggtcgcgaaacgggcccagggttacttc
ttcggggccttcaaggacgccatggtctttgccatcgtgccgccttcggttctggaactg
ggtaacgccaccggtttcgacgtgttcctgcaagaccaaggcggcgtcggccaccagaag
ttgatggatgcgcgtaaccagttcctcggtgccgcggcgcaaagcaagatcctggcgggc
gtacgccccaacggcgtgaacgatgagccgcagtacgagctgaccgttgacgacgagaag
gccagtgcccagggcatcagcctgtcggaaatccagcagaccctggcgattgccctaggt
ggcagctacgtcaacgacttcatcgaccgtggtcgtgtgaagaaggtgtacgtgcagggt
gacgcggccagccgcatgtcgccggaagacctggacaaatggtacgtacgcagtacctcc
gggaagatggtgcccctgtcggccatctcgtcgggcaagtggatctacggctcgcccaag
ctctcgcgttacaacggtgtagcggcgatggaaatcctcggtactccggcacctggttac
agtaccggtgacgcgatggcggaagtcgagcgcattgccaagagtctgccggccggtgtc
ggctactcgtggaccggcctgtcatatgaagaacgcctctccggctcccaggcgcctgcg
ctgtacgccctgtcgctgctggtggtgttcctgtgcctcgcggccctgtacgaaagctgg
tcgatcccgattgcggtgattctggtggtgccgctgggtgtgatcggtgccttgatcgcc
accagcctgcgcggcctgtccaacgacgtgttcttccaggtgggcctgctggtaaccgtc
ggtctggcggcgaaaaacgccatcctgatcgtggagttcgccaaagagctccacgaacag
ggcaagggcatcgtcgaggccgccatcgaagcgtcccgcatgcgtctgcgcccgatcatc
atgacgtccatggcgttcatgctcggcgtactgccgctggcgatttccaccggcgcaggt
tcaggcagccagcatgcaatcggtaccggcgtgatcggcggtatgatcacggcgactgtc
ctggcgatcttctgggtgccactgttctacgctaccgtgtcctccgccggcgaacgcaag
aagccggtggccattgaaactcctaaagaggctggccaatga
DBGET
integrated database retrieval system
