Pelagovum pacificum: I8N54_01930
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Entry
I8N54_01930 CDS
T06971
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
ppaf
Pelagovum pacificum
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppaf03009
]
I8N54_01930
Enzymes [BR:
ppaf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
I8N54_01930
Ribosome biogenesis [BR:
ppaf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
I8N54_01930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QQA43358
LinkDB
All DBs
Position
363573..364610
Genome browser
AA seq
345 aa
AA seq
DB search
MSGVQTITVGPDEGDQRIDRWLRRHFPQVTQGRIEKMCRKGELRVDGGRVKSSTRITSGQ
QVRIPPLPDTADPTPRRETISDADAKMIRDCVIYRDDHVIALNKPPGLPTQGGSKQTRHV
DGLAEALRFDYDDKPRLVHRLDKDTSGVLLLARTHRVAQELTAAIRHRATRKIYWALVAG
VPTPYLGEIRFGLIKAPGHGAAGENEKMRAVHPDDVQKTEGAKRAHTLYATLYRVAGRAS
WVAMEPITGRTHQLRAHMAAIGHPIIGDGKYGGSGQENLGDGWGAQLGGVISKKLHLHAH
SMTFQHPVTKKSVTVSAQLPEHMAHSWETFGWTEDLAADDPFESL
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgtccagaccatcaccgtaggcccggacgagggcgaccagcgcatcgaccgc
tggctgcgccggcactttcctcaggtcacgcagggccggatcgagaagatgtgccgcaag
ggagagctgcgcgtcgacggcgggcgggtgaagagctcgacccgtatcacctcgggccag
caggttcggatacccccgctgcccgacactgcggacccgacgccccggcgcgagacgatc
agcgatgcggatgcgaagatgatccgcgattgcgtgatctaccgcgacgaccatgtcatc
gctctgaacaagccaccgggactgccgacgcagggcggcagcaagcagacgcgccacgtg
gatggcctcgccgaggcgctgcgcttcgactacgacgacaagccgcggctggtgcaccgg
ctggacaaggacacctccggggtgctgctgctggcgcgcacgcatcgggtggcgcaggag
ctgacagcagcgatccggcatcgcgcgacccgcaagatctactgggcgctcgtggccggc
gtgccgacgccctatctcggcgagattcgctttggcctcatcaaggccccgggccatggc
gccgccggcgagaatgagaagatgcgcgcggtgcatcccgacgacgtgcagaagaccgag
ggcgcgaagcgggcgcacacgctctatgccacactctaccgcgttgcaggccgtgcgtcc
tgggtcgcgatggagccgattaccggacgcacgcaccaacttcgcgcgcacatggccgct
atcggacatccgatcatcggcgacggaaagtacggcgggtccgggcaggagaatctcggt
gacggctggggcgcgcaacttggcggcgtcatcagcaagaaacttcatcttcatgcccat
tccatgaccttccagcatccggtgacgaaaaagtcggtcaccgtctcggcgcagctgccc
gaacacatggcgcacagctgggagacgttcggctggaccgaggatctcgctgccgacgac
ccgttcgaatccctctag
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