Pelagovum pacificum: I8N54_17790
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Entry
I8N54_17790 CDS
T06971
Name
(GenBank) type I secretion system permease/ATPase
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
ppaf
Pelagovum pacificum
Pathway
ppaf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppaf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
I8N54_17790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppaf02000
]
I8N54_17790
02044 Secretion system [BR:
ppaf02044
]
I8N54_17790
Transporters [BR:
ppaf02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
I8N54_17790
Secretion system [BR:
ppaf02044
]
Type I secretion system
Multiple protein transporter
I8N54_17790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_30
AAA_16
SMC_N
AAA_22
AAA_29
Zeta_toxin
MMR_HSR1
RsgA_GTPase
MeaB
AAA_21
nSTAND1
AAA_33
AAA_28
NACHT
Motif
Other DBs
NCBI-ProteinID:
QQA42607
LinkDB
All DBs
Position
3618573..3620309
Genome browser
AA seq
578 aa
AA seq
DB search
MAKGIKGNGQEELAAARRESRGLYWFVAIFSLFVNLLMLTGPLYMLNVYDRVLGSRSLET
LIALTALVAFLYFLMGILDYARGRIMGRVGARFQSRMDERVFSAVLTATSTGRATEQAAS
GLRDLEAVQRLMTSPVLMAAFDLPWAPLFFFGIFLFHPWLGILALSGAGILILVAVANQL
GSRKPLSNANGATMQAESLGSRIRSESEMVQSLGMRGASFTRWKIARDRSLGATVGAADV
TGTYGAITKSFRLFLQSAMLGLGAYLVLQNELTAGAMIAGSILLGRALAPIELGVNQWSL
VQRAREGWGNLEVLLTEIPPESTPMPLPAPRAVLEARELTIIPPGEQAASLRMVSFRLEP
GQALGVIGASGAGKSTLARALTGLWRPAGGKIRIDGAALDQFAPDVLGQHIGYLPQRVQL
FEGTIAENIARMALQPDEAGVVKAAKRAAAHDMILKLPNGYDTRIDMNGGRLSGGQIQRI
GLARAMYGDPVVLVLDEPNSNLDNEGSQALNEAIRTFKREEKCVLIMAHRPAAIQECDLL
LMLEGGARRAFGPKDEVLREMVKNHEVIQKGSRPASVS
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggggatcaagggcaacgggcaggaggaactcgctgctgccagacgggaaagc
cgcggcctctactggttcgtggcgatcttcagcttgttcgtgaacctgctgatgctgacc
ggcccgctctacatgctcaacgtctatgaccgggtgctcggctcccgctcgctcgagacc
ctgatcgcactgacggcgctggtcgcgtttctctatttcctgatgggcatcctcgactat
gcccgtggccggatcatgggccgcgtcggcgcgcgcttccagtcgcggatggacgaacgc
gtgttcagcgccgtgctcaccgcgacctcgaccggccgcgcgacggagcaggcggccagc
ggcctgcgcgacctcgaagcagtgcagcggctgatgacctcgcccgttctgatggcggcc
ttcgacctgccgtgggcgccgctgttcttcttcgggatcttcctgttccacccgtggctc
ggcatccttgcgctgtcgggcgcggggatcctgatccttgtcgccgtcgccaaccaactc
ggcagccgcaaaccgctgtcgaacgccaatggcgcgaccatgcaggcggaatcgctcgga
agccgcatccgctccgaatcggaaatggtgcaatcgctcggcatgcgcggcgcatcgttc
acgcgctggaaaatcgcccgtgaccgctcgctcggcgcaacggtcggggcggcggacgtg
accggcacctatggcgcgatcaccaagtctttccgcctgttcctacagtcggcgatgctt
ggcctcggcgcctacctcgtcctgcagaacgagctgacggcgggcgcgatgatcgccggc
tccatcctgctgggccgggcgctcgcgccgatcgaactcggtgtgaaccagtggagcctc
gtccagcgtgcgcgagagggatggggcaacctcgaagtgctgctgaccgagatcccgccg
gaatcgacgccgatgcccctgcccgcgccccgcgcggtgctcgaagcgcgcgagctgacg
atcatcccgccgggcgaacaggccgcgtcgctgcgcatggtgtccttccggctcgaaccg
ggacaggcgctcggcgtgatcggcgcgtccggtgcgggcaagtcgacgctcgcccgcgcg
ctgacgggcctctggcgccccgccggcggcaagatccggatcgacggcgcggcgctggac
cagttcgcgcccgatgtcctcggccagcatatcggctacctgccccagcgtgttcagctg
ttcgaaggcacgatcgcagagaatatcgcccgcatggcgctgcaaccggacgaagccggg
gtagtcaaagctgcgaaacgcgccgcggcgcacgacatgatcctcaagctaccgaacggc
tacgacacccgcatcgacatgaacggcggtcgcctgtccggcggccagatccagcggatc
ggtctcgcccgcgcgatgtatggcgacccggtcgtgctggtgctggatgaaccgaactcc
aacctcgacaacgaaggctcgcaggcgctgaacgaggcgatccgcaccttcaagcgcgaa
gagaagtgcgtgctcatcatggcgcaccgtcccgccgcgatccaggaatgcgacttgctc
ctgatgctcgagggcggcgcccggcgtgccttcggtccgaaggacgaggtgctgcgcgaa
atggtgaagaaccacgaagtgatccagaagggcagccgcccggcgagcgtatcatga
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