Polynucleobacter paludilacus: AOC06_04850
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Entry
AOC06_04850 CDS
T08333
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
ppal
Polynucleobacter paludilacus
Pathway
ppal01501
beta-Lactam resistance
ppal01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ppal00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AOC06_04850
01503 Cationic antimicrobial peptide (CAMP) resistance
AOC06_04850
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppal02000
]
AOC06_04850
01504 Antimicrobial resistance genes [BR:
ppal01504
]
AOC06_04850
Transporters [BR:
ppal02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
AOC06_04850
Antimicrobial resistance genes [BR:
ppal01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AOC06_04850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
QWD86316
LinkDB
All DBs
Position
complement(907499..910546)
Genome browser
AA seq
1015 aa
AA seq
DB search
MKWTDLFINKPVLSLVVSALVLVFGFKAIGSLPVSQYPKTENAVVTITTNYYGADAQTMA
GFITQPLEQAIAQVQGIDYLSSTSVSGLSTITANLKLNYDSNAALTQIQTQISSVRNQLP
PQALQPVLTVQMSQTTDAMYMGFSSVDIPSNSVTDYLLREVKPKFDAVDGVQNAELIGGR
KFALRAWLNREKMAGLGVAADDVYNALSANNYLSAVGTTKGDMVSVDLMANTDLHTVEEF
RRLVIKSDGVNLVHLGEVATVTLGSEDYNTNVAFSGKQSVFIGIQVAPQANILNVVDRVR
KLLPGIQKQLPVGMTGQVVYDSTEFITSSISEVVKTLFEALIIVTVVIYLFLGSYRAVAI
PVIAMPLSLIGTFFLMQVLGYSINLLTLLALVLAIGLVVDDAIIVVENVDRHMKEGKSPF
DAAIIAARELGSPILAMTVVLIAVYIPIGFQGGLTGALFTEFAFTLASAVAVSGLIALTL
SPMMCSRIFKADQETTEFALKIDRVFEKVHHTYETALRSLLRTWQVVIVMGVILLGGVAY
LYSTSKAELAPTEDQGIVLMNLTGPPNSTVAQMQLYADQVFDMAKTEPEFAASFQITSPG
TGFGGINLKDYSQRSRSAMTLQQVLQNKWNSIAGVRIAAFQFPALPGSQGLPVQFVIKTT
EPYQALNEVSQAVLDKARRSGNFFFVDTDLKIDKPQDMLVIDKDKVSSLGMTQQQVGGAL
TAALGGGYVNYFSIAGRSYRVIPQVEQVNRLNPDQILDYYIRTPKGDLIQVRTFATIQKQ
VVPESINHFQQLNSATISGVSTPFISEGEVLKFLADTVKEVAPNGYSVDYAGPSRQFANE
SGGFLGTMFFAILIVFLVLAAQFESFRDPIVILVSVPLALFGALIFINLGFTTLNIYTQV
GLVTLMGLISKHGILIVEFANELQIAGRTKLEAIIEAATVRLRPILMTTFAMVLGVFPLV
IASGAGAAGRKSMGLVIFTGLSIGTLFTLFVVPSMYLFLGADHHDQKHPEPEISP
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggactgatctctttatcaataagccagttttatcgctggtagtgagtgcattg
gtcttggtttttggttttaaggcaattggctctttgccagtgagtcaatatccaaaaact
gaaaatgcggttgtcaccattaccacgaattactacggtgctgatgcgcaaaccatggcg
gggtttattactcagcctttggagcaagcgattgcacaggtacagggtattgattacctc
tcatccactagcgttagcggtctttctactatcactgcaaatctaaagctgaattacgac
tcgaatgcagctttaacgcagatacagacacaaattagttcagttagaaatcagcttcct
ccccaagcattgcagcctgtgctcacagtccaaatgagtcaaaccactgatgcgatgtat
atgggcttttcaagtgtggacataccgagcaatagcgtcaccgactatttgctacgggag
gtcaagccgaagtttgatgctgtggatggggttcagaacgcagagttaatcggtggcaga
aagtttgccttacgagcttggctgaatcgggaaaaaatggcgggtcttggagtcgctgct
gacgatgtctataacgccttatctgcaaacaactatctctcggcagtgggtactactaag
ggtgatatggtgtcggtcgatttaatggccaataccgatttgcataccgttgaagaattt
cgaaggttggtcattaaaagcgatggcgttaacttggtccatctcggtgaagttgccact
gtgactttgggttctgaggattacaacactaacgttgcttttagcggcaaacaatccgtt
tttattggtattcaagtagcgcctcaagcaaacatattgaacgtagttgaccgagtgcgc
aaactcttgcccggcattcaaaagcaattaccagttggtatgactggtcaggttgtttat
gactccacggaatttattacgagctcgattagtgaggttgtcaaaacgctgtttgaggca
ctgatcattgtgacagtggtgatttatttattcttgggaagctatcgagctgttgcgatt
ccggtgattgcgatgcccttgtcgctaattggtaccttcttcctcatgcaggtgctgggt
tactcgattaatttgctgactttattagcgctggtgcttgccattggtctggtggttgat
gacgccatcatcgtggtggaaaacgttgaccgtcatatgaaagaaggtaaatcgcctttt
gatgctgcgattattgccgcacgagaacttggtagcccaattctagcgatgaccgtggtc
ttgatcgcggtttatatcccaattggctttcagggtggcttgaccggcgcattgtttact
gagtttgcatttacgttggcgagtgccgtagccgtctcgggactcattgcgttgacctta
tcgcccatgatgtgttcacgcatctttaaagcggatcaagagacgacagaatttgcttta
aagattgatcgtgtgtttgagaaggttcatcacacctatgaaacagccttacggagtctg
ttgagaacctggcaggttgtgatcgtaatgggtgtcatcctgcttggtggcgtagcttac
ttatactcgacctccaaagccgaattggctcccacagaggatcaagggattgtcttgatg
aatttgaccggtccgcccaacagcaccgtagcgcagatgcagctctatgcagaccaagtt
tttgatatggctaaaacagagcctgagtttgccgcatcgtttcaaattacgagtccaggt
actggctttggcggtatcaatctaaaagactattcacagcgtagccgcagtgcaatgact
ctgcagcaggttctccaaaacaagtggaactcgatcgcaggtgtccggattgcagccttc
cagtttccggctttgcctggttcgcaaggcttgcctgttcagttcgttattaaaacaact
gaaccctaccaagctttaaatgaagtctcacaagctgtgcttgataaagccagaagaagt
ggcaattttttctttgtggatacagacttaaagattgataaacctcaggatatgctggtg
atcgacaaggataaggtgtcttctctcggcatgacccaacagcaggtagggggcgcttta
acagcggccttgggtggtggttacgtaaattacttctcgatcgcaggacgttcgtatcgc
gtcattccgcaagtggagcaggtcaatcgcctgaatccagaccaaatcttggattactac
atcagaactccgaagggggatttgatacaggtcagaacttttgcaactatccaaaagcag
gtggtgcctgagtccattaatcattttcagcaactgaattcagcaacaatttctggggtg
agtactccgtttatttctgaaggggaggtcttgaagtttttggctgatacggtaaaagaa
gtcgcccccaatggttactcagttgactatgcaggaccatcccgtcagtttgctaatgaa
tctggtggtttcctgggcacaatgttctttgcgatcctgatcgttttcttggtcttagca
gctcagtttgagagctttagggatccgattgtgattttggtctcggtaccgctggcttta
tttggcgccttaatctttatcaatcttggctttactacgctcaatatctatacccaggtt
ggcttagtaactctgatgggtttgattagtaagcacggtattttgattgtcgaatttgca
aacgagttacaaattgctggtagaacgaagttggaggcaattattgaggctgccacagtt
cgacttaggccgattttgatgactacctttgcgatggtattaggagtttttccactggta
attgcttcgggagcaggagctgcagggcgcaagtcgatgggtctagtgatcttcactggc
ctatcaattggaacgctctttacactttttgtggttccttccatgtacctcttccttggc
gctgatcaccatgatcaaaaacatcccgagcccgaaatttctccttaa
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