Polynucleobacter paludilacus: AOC06_06535
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Entry
AOC06_06535 CDS
T08333
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ppal
Polynucleobacter paludilacus
Pathway
ppal00540
Lipopolysaccharide biosynthesis
ppal01100
Metabolic pathways
ppal01250
Biosynthesis of nucleotide sugars
Module
ppal_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppal00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
AOC06_06535 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ppal01005
]
AOC06_06535 (rfaD)
Enzymes [BR:
ppal01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
AOC06_06535 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
ppal01005
]
Core region
AOC06_06535 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
KR
Motif
Other DBs
NCBI-ProteinID:
QWD86611
LinkDB
All DBs
Position
complement(1234504..1235523)
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AA seq
339 aa
AA seq
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MTIIVTGAAGFIGANIVQGLNARGEKNIIAVDDLRPADKYRNLADLDIIDYLDKDEFLEA
FRSGRFGKVRAVFHEGACSDTMETDGIFMMANNYRYTMDLLDICTEQKVQLLYASSAATY
GGSDVFVESREHEKPLNIYGYSKFLFDQVMRKRFAEKANTAQVVGFRYFNVYGPRESHKG
RMASVAFHQYHQYKKDGLVKLFGEYGGYAQGQQSRDFVSVEDVVKVNLFFFDHPEISGIF
NLGSGRAQPFNDVAHAVVNSLRKRDGANSESLEQLVKMKAIEYIPFPEALKGKYQCFTQA
DLTKLRAAGYTEPFLNVEQGVSRYIDWLTANADFLANPL
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgactattatcgtaactggagctgctgggtttatcggcgccaatattgttcagggcctc
aatgctcgtggtgagaaaaatatcattgcagtcgacgacttgcgtcctgccgataaatat
cgcaatttagctgatctcgacattattgattatcttgataaagatgaatttttagaggca
tttagaagtggtcgctttggcaaggtcagggcggtctttcatgaaggggcttgctccgat
acgatggaaaccgatggcatcttcatgatggcgaataactatcgctacaccatggatttg
ctcgatatctgcaccgagcaaaaagtgcaattactctatgcctcctctgcagcaacctat
ggcggttcagatgtgtttgttgaaagccgtgagcacgagaagccgctcaatatttatggc
tattccaaattcttatttgaccaagtgatgcgcaagcgttttgctgaaaaagccaatacc
gcccaagtagttggttttagatatttcaatgtgtatggcccacgtgaatcccacaaaggt
cgtatggcatcagtagccttccatcaataccaccaatacaagaaagacgggctggttaag
ctctttggtgaatatggtggctatgcacaaggacagcaaagccgtgactttgtctcggta
gaggatgtagtgaaggtcaacctcttcttctttgatcatccagaaatcagcggcatcttt
aatttgggaagtggccgtgcccaaccctttaatgatgtagcccatgccgtagtgaattca
ctcagaaagcgagatggggctaattcagaatcattagaacaacttgtcaagatgaaggcg
attgagtacattccatttccagaagcactcaaaggtaagtatcagtgctttacacaggca
gacctcaccaaactcagagccgccggttacaccgagcccttcctcaatgttgagcaaggt
gtcagtcgttatatcgactggttaactgccaatgcggatttcttagccaatcccttatag
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