Pteronotus mesoamericanus (Parnell's mustached bat): 129064768
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Entry
129064768 CDS
T09558
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03013
Nucleocytoplasmic transport
ppam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129064768 (UPF3A)
03015 mRNA surveillance pathway
129064768 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppam03019
]
129064768 (UPF3A)
Messenger RNA biogenesis [BR:
ppam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
129064768 (UPF3A)
mRNA cycle factors
P-body specific factors
129064768 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
129064768
NCBI-ProteinID:
XP_054421877
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MRSEKEGPGGPRAAVAMRGQSGRERTSAVGTPQESPRREAGAPPALSSSCGGSAGKPREE
KRTVLSKVVIRRLPPSLTKEQLEEHLHPLPAHDYFEFFTADLSLYPHLYSRAYINFRNPD
DILLFRDRFDGYIFIDNKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIDNDPEYKKFLE
TYFLEEEKVSANPETLLGDIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRRR
ELEKKRIREEEKRKRREEEKCKRKEIDKQKKIAEKEVRIKSSTPRPPLSQLEYQGGSQPP
RHEPVPILACRNRAAQQELLKKPEKGEEAATEKPKEPGEEIDTGDGQWEACPGCAVVKAK
PWDNLPEERREKSHNDSDKEQKEMERKFREKELETQKYHLDDSRKLRAHYEFDKFSRRNE
EMNLGKAFTPDRGKAGSQDRGIPVEATERPGREQKSEDGLAPRKANVRNKDRPSLPLYQP
GARMRARECGGRFSEEGRAGRRAEAEDSTGAGSRKSKEAE
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcggaaaaggaggggcccggaggccccagggcggcagttgctatgcggggccag
agcgggagggagaggacgtcagctgtggggactccacaggagtctccacggagagaggca
ggagcaccgccagccttgtcctccagctgtgggggcagcgcaggcaaacctcgcgaggag
aagaggactgtcctgagcaaggtggttatccggcgccttcctcccagcctcaccaaggag
cagctggaagagcacctgcacccgctacctgcacatgattactttgagttctttactgcg
gatctcagtctttatcctcatctctactcaagagcatacattaattttagaaatcctgac
gacattcttctttttagagatcgttttgatggatatatcttcattgacaataaaggccta
gagtatcctgcagtggtagagtttgctccattccagaagatagccaaaaagaagctaaag
aaaaaagatgccaaaactggaagcattgacaatgatccagaatataagaagtttttagaa
acttatttcttggaggaagagaaagttagtgccaatcctgaaactcttctgggagacata
gaggcaaagacaagagaacttattgctagaagaaccacacctcttttggaatacattaaa
aatagaaaattagaaaagcagagaattcgagaagagaagcgagaagagcgaagacgaagg
gagttggaaaagaaacgcatacgagaagaagaaaaaagaaagagaagagaagaagaaaaa
tgtaagagaaaagaaatagacaaacaaaagaaaattgctgagaaagaagtaaggattaag
tcttccaccccacggccaccactgtcacagctagagtatcaagggggttcccagcctccg
cgtcatgaaccagtaccaatcctggcctgtaggaaccgggccgcacagcaggagcttctt
aagaaaccagaaaagggagaggaagcagccaccgagaaaccaaaagaaccaggagaggaa
attgatactggagatggacaatgggaagcctgtcctggctgtgctgtcgtgaaggccaag
ccctgggacaacctgccagaggagcgcagggaaaagtcacacaatgacagtgataaagag
caaaaggaaatggagaggaaatttcgagaaaaagaacttgaaacacaaaaataccacttg
gatgacagcagaaagcttagagctcactatgagtttgacaagttctccagaagaaacgaa
gagatgaacttggggaaagcattcaccccagacagagggaaggcagggagccaggaccgt
ggcatccctgtggaagcaacagagagaccagggagggaacagaagagtgaggatggcctg
gcacccagaaaggcgaacgtgcgaaacaaggaccggccgtccttgccgctgtaccagcca
ggagctcgcatgagagcacgtgaatgtggtggaagattctctgaggagggccgtgctggg
cggagggctgaggcagaagattcaacaggggctggttccaggaagagcaaagaggcagaa
tga
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integrated database retrieval system
