Pteronotus mesoamericanus (Parnell's mustached bat): 129075208
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Entry
129075208 CDS
T09558
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129075208 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppam03021
]
129075208 (SF3B3)
03041 Spliceosome [BR:
ppam03041
]
129075208 (SF3B3)
03036 Chromosome and associated proteins [BR:
ppam03036
]
129075208 (SF3B3)
Transcription machinery [BR:
ppam03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
129075208 (SF3B3)
Spliceosome [BR:
ppam03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
129075208 (SF3B3)
Complex B
129075208 (SF3B3)
Complex C
U2 SnRNP specific factors
129075208 (SF3B3)
Chromosome and associated proteins [BR:
ppam03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
129075208 (SF3B3)
TFTC complex
129075208 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
Motif
Other DBs
NCBI-GeneID:
129075208
NCBI-ProteinID:
XP_054435180
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgtacaacctgaccctgcagcgagccacgggtatcagctttgccattcatggc
aacttctctggaaccaaacaacaggaaattgttgtttctcgtgggaagatcttggagctc
cttcgcccggatcccaatactggcaaagtacacaccctactaactgtggaagtatttggt
gttattcggtctctcatggcctttaggctgacaggtggcaccaaagactacattgtggtt
ggcagtgattcagggcgaattgttatcctggaataccagccatctaagaatatgtttgag
aaaattcaccaagaaacctttggcaagagtggatgccgccgtattgttcctggccagttc
ttagctgtggatcctaaagggcgagctgttatgattagtgccattgagaaacagaaattg
gtgtatatcttgaacagagatgctgcagcccggcttaccatctcatctcccctagaggcc
cacaaagcgaacactttagtatatcatgtggttggcgtagatgtgggatttgaaaatcca
atgtttgcttgtctggaaatggattatgaggaagcagacaatgacccaacaggggaagcg
gcagctaatacccagcagacgcttactttctatgaattagaccttggtttaaatcatgtg
gtccgaaaatacagtgagcctttggaggaacatggcaatttccttattacagttccgggt
gggtcagatggtccaagtggagtgctgatctgctctgaaaactatatcacctacaagaac
tttggtgaccaaccagatatccgctgtccaattcccaggagacgaaatgacctggatgac
cctgaaagaggaatgatttttgtctgttctgccacccataagaccaaatcgatgttcttc
tttttggcccaaactgagcagggtgatatcttcaagatcactttggagacagatgaagat
atggtaactgagattcggctcaagtattttgatactgtgccagttgctgctgccatgtgt
gtgcttaaaacaggcttcctttttgtagcatcagaatttggaaaccattacttatatcaa
attgcacatcttggagatgatgatgaagaacctgagttttcatctgccatgcctctggaa
gaaggagacacgttcttctttcagccaagaccgctcaaaaacctagtactggttgatgag
ttggacagcctttcccccattttgttttgccagatagctgatcttgcaaatgaagacact
ccacaactgtatgtggcctgtggtaggggaccgcgatcatctctgagagtcttaaggcat
ggacttgaggtgtcagaaatggctgtctctgaactacccggtaaccccaatgctgtctgg
acagtgcgccggcacattgaagatgagtttgatgcctatatcattgtgtctttcgtgaat
gccactcttgtgttgtctatcggagagactgtggaagaagtgactgactctgggttcctg
ggcaccactccaaccttgtcctgctccttgttaggagatgatgccttggtgcaggtgtat
cctgatggcattaggcacatacgagcagacaagagagtcaatgaatggaagacccctgga
aagaaaacaattgtgaaatgtgcagtgaaccagcgacaagtagtgattgccctgacagga
ggagagctggtctattttgaaatggatccctcaggacagctgaacgagtacacagagcgg
aaggagatgtcagcagatgtggtgtgtatgagtctggccaacgtgcctcctggagagcag
cggtctcgcttcctggctgtgggactggtagacaacactgtcagaatcatctccctggac
ccctcagactgtttgcagcctctgagcatgcaggctctcccagcccagcctgaatccttg
tgtatcgtggaaatgggtgggactgagaagcaggatgagttgggtgagaggggctctatt
ggcttcctatacctgaatattgggctacagaatggtgtgctactgagaactgtcctggac
cctgtcacaggagatctatctgacacccgcactaggtacctagggtcccgtcctgtgaaa
ctctttcgtgttcggatgcaaggccaggaggcagtgttggccatgtcaagccgctcatgg
ttgagttattcttaccaatctcgtttccatctcaccccactgtcttatgagaccctggaa
tttgcatctggcttcgcctctgaacagtgccctgagggcattgtggccatctctaccaac
actctgaggattttggcgttggagaagctaggtgcagtctttaatcaagtagcctttcca
ctgcagtacacacccaggaaatttgtcattcaccctgagagtaataatcttatcatcatt
gaaactgaccacaatgcctacactgaggctacaaaagctcagaggaagcagcagatggca
gaggaaatggtagaagcagcaggagaagatgagcgagagctagcggcggagatggcagca
gcttttctcaatgaaaaccttcctgagtccatttttggagctcccaaggctggcaatggg
cagtgggcctctgtgatccgagtgatgaatcctattcagggtaacacactggaccttgtc
cagctggaacagaacgaggctgcttttagtgtggccgtgtgcaggttctccaatactggt
gatgactggtatgtgctggtgggcgtggccaaagacctgatactgaaccctcgatctgta
gcagggggctttgtctatacctacaagcttgtgaacaatggggaaaaactggagtttttg
cacaagactccagtggaagaggtccctgctgcgattgccccgttccagggtagggtgttg
attggtgtggggaagcttctgcgggtctatgacctgggaaagaagaagttactccgaaaa
tgtgagaacaagcatatcgccaattacatctctgggatccagactattgggcacagggta
atagtatctgatgtccaagaaagtttcatctgggttcgctacaagcgtaatgagaaccag
ctcatcatctttgctgatgatacctacccccggtgggtcactacagctagtcttctcgat
tatgacactgtggctggggcagacaagtttggcaacatttgtgtggtgaggctcccacct
aacaccaatgatgaagtggatgaggatcccacaggaaacaaagctctgtgggaccgaggc
ttgctcaatggggcctctcagaaggcagaggtgatcatgaactatcatgtcggagagaca
gtactgtcattgcagaagaccacgttgatccctggaggctcagaatcgcttgtctatact
accttgtcaggaggaattggcatccttgttccattcacatctcatgaggatcatgacttc
ttccagcatgtagaaatgcacctacggtctgagcatccccctctttgtggaagagatcac
ctcagctttcgttcttattatttccctgttaagaatgtgattgatggagacctctgtgag
cagttcaactccatggagcccaacaaacaaaagaatgtctctgaagaactagaccgaact
ccacctgaggtgtccaagaagcttgaggacatccggacccgctatgccttctga
DBGET
integrated database retrieval system
