Pectobacterium parmentieri RNS08.42.1A: A8F97_12790
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Entry
A8F97_12790 CDS
T04513
Name
(GenBank) ABC transporter
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
ppar
Pectobacterium parmentieri RNS08.42.1A
Pathway
ppar02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
A8F97_12790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppar02000
]
A8F97_12790
02044 Secretion system [BR:
ppar02044
]
A8F97_12790
Transporters [BR:
ppar02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
A8F97_12790
Secretion system [BR:
ppar02044
]
Type I secretion system
Adhesin protein transporter
A8F97_12790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
DUF87
RsgA_GTPase
Gtr1_RagA
ABC_ATPase
ATP-synt_ab
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AOR59776
UniProt:
A0A0H3I1G3
LinkDB
All DBs
Position
2832492..2834708
Genome browser
AA seq
738 aa
AA seq
DB search
MKLHSVQETKGSDELVTHEPTIHEPIVHENSDPRSRHDDPLLDGLLILCALQGKSVSRTT
LTAGLPLANQRLSVKLLPRAAARAGLQGRVLKRSLNKISEMSLPAMLLLREGGAAILLGW
NVDGSARLMPSETEGGEISVEHNTLQQNYLGLVMFAQPRHQFDLQNPSLIPHTKSWFRDT
LKLSRSLYLDAILASLLVNIIALATPLFVMNVYDRVVPNQATATLWVLAIGVTGAFVFDL
ILKTLRGICLDMAGKKTDLIISATLFERITGMSMKARPPRVGSFAQNIHEFQSLRDFLSS
LTLTTLIDFPFTLLLLLVIGIIGGPLVWVSILAYPIALLASWAMQKPLSATIEKTMHLAS
ERQATLIETLSCLDAIKVNNAESERQHQWEQTIGSLSKLEMRVKALSSLAVNLTQWFQQF
AGVAMIVVGVYLLINGKLSMGGLIACYMLNGRALMPLGQLSGLVSRYQQARLTMQTTEQM
MQLPQERSDNEHPLKRESIRGGIEFRDVTFNYPEQKTSSLQSISLTIAPGEKVGVIGRSG
SGKSSLQKLIVNLYQPNTGNILIDGVDARQLDVSDLRHNIGYVPQDIQLFSGSLRNNLIS
GARYVEDEAMLRAAEISGVNEFARLHPDGYNLQVGERGQQLSGGQRQAVAIARALLLDPP
ILVLDEPTSSMDNTSEDRLKQALTPIIAEKTLLLVTHRVSMLALVDRLVIVDKGKIIADG
PKAIVMDALKKGQINASR
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgcactcagtacaagagacgaagggttctgatgaattggtcacccatgagcct
accattcatgaacccatcgtccatgaaaatagtgaccctcgcagccgccatgatgatcct
ttattggatggtttgctgatcctctgtgccttgcaggggaaatctgtcagccgtaccaca
ctcaccgctggtttgcccttagctaaccagcgattgtccgtaaaattgcttccaagagcc
gctgctcgcgcaggattacagggacgtgttctcaaacgctccctgaataaaatttctgag
atgtcactccctgcgatgttgctgttacgggaaggtggagcagcaattctgttaggctgg
aacgtcgatggcagtgcacgattgatgcccagtgaaacagaaggcggggaaatttccgtt
gagcataatacgctgcaacagaattaccttggcttagtgatgttcgcccagcctcgccat
cagttcgatctgcaaaatccgtcgctgatcccccataccaaatcctggtttagagatacg
cttaagctctcacgttcgctctatctcgatgccatcctcgccagtttgctggtgaacatt
atcgcactggccacgccgctcttcgtgatgaatgtctatgacagggttgtgcctaatcaa
gcaacagcgacattgtgggtgctggctatcggcgttactggcgcttttgttttcgatttg
atactcaaaacgctgcgtggcatttgccttgatatggcggggaaaaaaaccgatctgatt
atttctgccacgttatttgaacgtattaccggtatgtcgatgaaggctcggccaccgcga
gtcggtagttttgcgcaaaatattcatgaatttcagtcactcagagattttttgtcctca
ctaacgctgacgacgctgatcgattttccctttacgctgcttctgctgttagttatcggt
atcatcggcggcccgctggtctgggtttccattctggcctaccctatcgccctgctggcg
agttgggcaatgcaaaaaccgctgtctgccacgattgaaaaaacaatgcaccttgccagt
gaacggcaggctacgctgatcgaaacgttgagctgtctggatgcaatcaaagttaataat
gcagaaagcgagcggcagcaccagtgggaacagacgattggcagcctgagcaagctggaa
atgcgggtgaaggcgttgtcttcactggcggtaaacctgacgcaatggttccagcaattt
gctggcgtggctatgattgtcgtcggcgtctatctgctgattaacggcaaactcagcatg
ggtgggctgattgcctgttacatgctgaacggcagagcgcttatgccgttaggtcaactg
tctggtctggttagtcgttatcagcaggcgcgtttgacgatgcaaaccaccgaacagatg
atgcaactaccgcaagagcgtagcgataacgaacacccgctgaagcgcgaaagcatccga
ggtgggatcgaatttcgcgatgtgacgttcaactacccggaacagaaaaccagttcgctg
caaagtatcagtctgaccatcgctcccggcgagaaagtgggcgtcattggtcgcagcggt
tcaggaaaaagctcattgcaaaagctgatcgtgaacctctatcagcccaacacgggtaat
attctgatcgacggggttgatgcccgtcagttggacgtcagtgatttacgccacaatatc
ggttatgttcctcaggatattcagttattcagtgggtcgctgcgcaataaccttattagc
ggcgcacgctatgtcgaagatgaagccatgctaagagcggctgaaatttcaggggtaaac
gagtttgcacgcctgcaccccgatggctacaaccttcaggtcggtgaacgcgggcaacaa
ctttctggcgggcagcgtcaggctgtcgcgatagcaagagcactattgcttgaccctccg
attctggtactggatgaacccaccagttcgatggataacaccagcgaagatcggctaaaa
caagctctcacccctataattgcagagaaaacgctgttgctggttacccatcgggtttcc
atgttggcactggtcgatcgtttagtgattgtcgataaaggcaaaattattgcagatggg
ccgaaagcgatcgtgatggatgcgttgaagaaggggcagatcaatgcgtctcggtaa
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