Pectobacterium parvum: LOZ86_07115
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Entry
LOZ86_07115 CDS
T07916
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ppav
Pectobacterium parvum
Pathway
ppav00521
Streptomycin biosynthesis
ppav00523
Polyketide sugar unit biosynthesis
ppav00541
O-Antigen nucleotide sugar biosynthesis
ppav01100
Metabolic pathways
ppav01110
Biosynthesis of secondary metabolites
ppav01250
Biosynthesis of nucleotide sugars
Module
ppav_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LOZ86_07115 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LOZ86_07115 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LOZ86_07115 (rfbC)
Enzymes [BR:
ppav01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LOZ86_07115 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
DUF4738
Motif
Other DBs
NCBI-ProteinID:
UFK40604
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All DBs
Position
complement(1584374..1584910)
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AA seq
178 aa
AA seq
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MQIIDTTIHGAKIIQPKVFGDARGFFLETFEKKRYQKMLNIDVDFVQDNHSRSSKGVLRG
LHFQKTNPQGKLVRVVHGEVFDVAVDIRQNSPSYGEWCGVTLSEENKTQFWLPPGLAHGF
VVLSDIADFEYKCTDYYDPSDEGCLLWNDPAIGIEWPISAPLLSEKDKLGRLFKDLAK
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattattgatactactattcacggtgcaaaaattattcagccgaaagtattcggc
gatgcacgaggtttttttctggaaacgtttgagaagaaacgctatcagaagatgctgaat
attgatgtagactttgttcaggataaccattcccgctcaagtaaaggcgtattacgcggt
ctgcatttccagaaaacgaacccacaaggaaagctcgtccgtgttgtacacggtgaggtg
tttgatgttgccgtagatattcgtcagaactccccttcctacggtgaatggtgcggtgta
acactgtcggaagaaaacaaaacccagttctggctaccgcccggcttagcgcatggtttt
gttgtgctctctgatattgccgatttcgaatataaatgtacggattattatgatccgagc
gatgaaggctgcctgttatggaatgatcctgcgattggcattgaatggccaatatcagcc
ccgctgttatccgaaaaagataagttaggtaggttattcaaggatctagcaaaatga
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