Pectobacterium parvum: LOZ86_20315
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Entry
LOZ86_20315 CDS
T07916
Name
(GenBank) TIGR01212 family radical SAM protein
KO
K07139
uncharacterized protein
Organism
ppav
Pectobacterium parvum
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
LOZ86_20315
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM_C
Radical_SAM
zf-4CXXC_R1
Motif
Other DBs
NCBI-ProteinID:
UFK39183
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Position
complement(4506095..4507033)
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AA seq
312 aa
AA seq
DB search
MQLQKLINMFGGNLQRRYGEKIHKLTLHGGFNCPNRDGTLGRGGCTFCNVASFADEQMQQ
RSIAQQLEAQAGKVNRAKRYLAYFQAYTSTYAEVQVLESMYQEALKQAEMVGICVGTRPD
CVPDAVLDLLSRYHEQGYEVWLELGLQSACDKTLHRINRGHDFACYQETTRRARDRGLKV
CSHLIVGLPGEDAQRCLSTLEQVVETGVEGIKLHPLHIVEGSTMAKAWQAGRLPELALDR
YVETAGEMIRHTPPDVIYHRISASARRPTLLAPLWCENRWTGMVELDRYLQTHGVQGSAL
GTPYRYEGFDAS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgcaaaaattaatcaatatgtttggcggaaatcttcaacgtcgctatggcgag
aagatccacaagctgacgctgcacggtgggtttaactgtccaaaccgtgatggcacgctg
gggcggggcggttgcacgttctgtaatgtggcctcgtttgccgatgagcagatgcagcaa
cgcagcatcgcgcagcagttggaagcgcaggcgggaaaggtgaaccgagctaaacgctat
ctggcgtattttcaggcgtataccagcacctatgccgaggttcaggtgctggaaagcatg
tatcaggaagcgttgaagcaggccgaaatggtggggatttgcgtgggcacccgccccgac
tgcgtgcccgatgcggtgctggatttgctgtcccgctatcatgaacaaggctacgaggtc
tggctggaactggggctgcaaagcgcatgcgacaaaacgctgcaccggattaatcgcggg
catgacttcgcctgttatcaggaaaccactcgccgcgcgcgtgatcgcggtctgaaagtg
tgtagtcatctgattgtcggtttaccgggagaagacgcccagcgctgcttatcgacgctg
gagcaggtggttgaaaccggtgtagagggcattaagctgcatcctctccatatcgtggaa
ggcagcacgatggcgaaggcctggcaagcgggaaggctgcccgaactggcgctggatcgc
tacgtggagacggcgggagagatgattcgccatacgccgccggatgtgatttatcaccgc
atttccgccagcgctcgccgcccgaccctgctggcaccgctctggtgtgaaaaccgctgg
acgggcatggtggaactggatcgctatctgcaaacgcatggcgtacagggttccgcgctg
ggtacaccttaccgttacgaggggtttgatgcgtcataa
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