Pseudomonas putida BIRD-1: PPUBIRD1_0091
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Entry
PPUBIRD1_0091 CDS
T01975
Symbol
tag
Name
(GenBank) Tag
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PPUBIRD1_0091 (tag)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppb03400
]
PPUBIRD1_0091 (tag)
Enzymes [BR:
ppb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
PPUBIRD1_0091 (tag)
DNA repair and recombination proteins [BR:
ppb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PPUBIRD1_0091 (tag)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
DUF1731
ERG2_Sigma1R
Motif
Other DBs
NCBI-ProteinID:
ADR57800
LinkDB
All DBs
Position
100227..100712
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AA seq
161 aa
AA seq
DB search
MPQRDPALLFEMLLLEGFQAGLSWITVLRKRERYRQVMYGFDPVKLAAMSDERIEELMQD
AGIIRNRLKLKAARRNAQAWLAVDNPAEWLWSFIGGSPKINHFKQRSDVPAVTDEAKAMS
KALQKAGFTFVGPTICYAFMQATGMVMDHTTDCDRYAALLR
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgccacagcgcgacccggcgttgctcttcgagatgcttttgctcgaagggttccaggcg
gggctttcgtggattaccgttttgcgcaaacgcgagcgttatcgtcaggtgatgtacggc
ttcgacccggtaaagctggcggccatgagcgacgaacgcatcgaagaattgatgcaggat
gcaggcatcatccgcaatcgcctcaagctcaaggctgcacggcgcaatgcccaggcctgg
ctggctgtggataaccctgccgaatggctgtggtcgttcatcggcggctcgccgaagatc
aaccacttcaagcagcgcagcgatgtgccggcggtcaccgatgaagccaaggcaatgagc
aaggccctgcagaaagctggcttcacgttcgtcggtccgaccatctgctacgccttcatg
caggccaccggcatggtcatggaccacaccaccgactgcgatcgctacgccgccttgttg
cgctga
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integrated database retrieval system
