Pseudomonas putida BIRD-1: PPUBIRD1_0292
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Entry
PPUBIRD1_0292 CDS
T01975
Name
(GenBank) DTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb00521
Streptomycin biosynthesis
ppb00523
Polyketide sugar unit biosynthesis
ppb00541
O-Antigen nucleotide sugar biosynthesis
ppb01100
Metabolic pathways
ppb01110
Biosynthesis of secondary metabolites
ppb01250
Biosynthesis of nucleotide sugars
Module
ppb_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PPUBIRD1_0292
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PPUBIRD1_0292
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PPUBIRD1_0292
Enzymes [BR:
ppb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PPUBIRD1_0292
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ADR57995
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All DBs
Position
complement(339260..339805)
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AA seq
181 aa
AA seq
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MNIIPTAIPEVLIIEPKVFADSRGFFFEAFNAREFSQQTGVNVAFVQDNHSRSIKGVLRG
LHYQVANTQGKLVRVVHGEIRDIAVDVRKSSPTFGKWVAVHLSADNHRQLWIPPGFAHGF
AVMSESAEFLYKTTDYYNPGADRCIRWDDPQLDIDWGLQQPPLLSDKDKVGLPLAEAELL
P
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcatccctacagcaatccctgaagtactgatcatcgagccaaaggtgttcgct
gacagccgtggttttttcttcgaggcattcaacgcccgtgagttctcacagcaaaccggc
gtgaacgtggcgttcgtccaggacaaccactcgcgctccatcaagggcgtgctccgtggg
ctgcactaccaggtggcaaacacccagggcaagctggtgcgcgtggtgcacggggagatc
cgcgatatcgccgtggacgtgcgcaaaagctcaccaacattcggcaaatgggttgcggta
cacctgtcggccgacaaccaccgccagctgtggattccgcccggcttcgcccacggtttt
gcggtgatgagtgaatcggccgagttcctctacaagaccaccgactactacaacccgggc
gccgaccgctgtatccgctgggacgacccgcaactggacatcgactgggggctgcagcag
ccaccgctgttatcggacaaggacaaggtaggcctgccattggcagaggcggaactgctg
ccttaa
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