Pseudomonas putida BIRD-1: PPUBIRD1_0392
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Entry
PPUBIRD1_0392 CDS
T01975
Symbol
glcB
Name
(GenBank) GlcB
KO
K01638
malate synthase [EC:
2.3.3.9
]
Organism
ppb
Pseudomonas putida BIRD-1
Pathway
ppb00620
Pyruvate metabolism
ppb00630
Glyoxylate and dicarboxylate metabolism
ppb01100
Metabolic pathways
ppb01110
Biosynthesis of secondary metabolites
ppb01120
Microbial metabolism in diverse environments
ppb01200
Carbon metabolism
Module
ppb_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
PPUBIRD1_0392 (glcB)
00630 Glyoxylate and dicarboxylate metabolism
PPUBIRD1_0392 (glcB)
Enzymes [BR:
ppb01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.9 malate synthase
PPUBIRD1_0392 (glcB)
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Gene cluster
GFIT
Motif
Pfam:
MS_TIM-barrel
MSG_insertion
MS_C
MS_N
Motif
Other DBs
NCBI-ProteinID:
ADR58087
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All DBs
Position
complement(457051..459228)
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AA seq
725 aa
AA seq
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MTGYVQVGGLQVAKVLYDFVNNEAIPGTGIVAEQFWAGAEKIINDLAPKNKALLAKRDEL
QAKIDAWHQARKGQAHDAAAYKAFLQEIGYLLPQADDFQATTQNVDEEIAHMAGPQLVVP
VMNARFALNAANARWGSLYDALYGTDAISDEGGAEKGQGYNKIRGDKVIAFARAFLDEAA
PLAAGSHVDSTGYRIEGGKLVVALKGGSNTGLRDDAQLIGFHGDAAAPTAVLLKHNGLHF
EIQVDASTPVGSTDAAGVKDILMESALTTIMDCEDSVAAVDADDKVIVYRNWLGLMKGDL
AESVSKGGKTFTRTMNPDREYAAPNGGSVTLHGRSLLFVRNVGHLMTNPAILDAQGNEIP
EGIQDGLFTNLIALHNLNGNTSRKNTRSGSVYIVKPKMHGPEEVAFAAEIFSQVEDLLGM
PRNTVKVGIMDEERRTTVNLKSCIKAAAERVAFINTGFLDRTGDEIHTSMEAGAVVRKGA
MKNEKWIGAYENNNVDVGLATGLQGRAQIGKGMWAMPDLMAAMLEQKIAHPLAGANTAWV
PSPTAATLHALHYHKVDVQARQRELASRTPASVDDILAIPLAADTNWSAEEIRNELDNNA
QGILGYVVRWIDQGVGCSKVPDINNVGLMEDRATLRISAQLLANWLRHGVVSQEQVLESL
KRMAVVVDQQNAGDPLYRPMAPNFDDNVAFQAAVELVVEGGKQPNGYTEPVLHRRRREFK
ARNGL
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgactggatacgttcaagtcggtggccttcaggtcgccaaggtcctgtacgacttcgtg
aacaacgaagccatccccgggaccggcatcgtcgccgagcagttctgggcgggtgcagag
aagatcatcaatgacctcgctccaaagaacaaagccctgctcgccaagcgcgacgagctg
caagccaagatcgacgcctggcaccaggcacgcaaaggccaggcccacgacgccgcagcc
tacaaagcattcctccaggaaatcggctacctgctgccacaagccgacgatttccaggcc
accacccagaatgtggacgaagaaatcgcccacatggccggtccacaactggtcgtgccg
gtgatgaacgcccgcttcgccctgaacgccgccaacgcccgctggggttcgctgtacgat
gccctgtacggcaccgacgccatcagcgatgaaggcggcgccgaaaaaggccagggttac
aacaagatacgcggcgacaaggtcatcgccttcgcccgcgccttcctcgacgaagccgcg
ccactggccgccggctcgcacgtcgactccacgggctatcgcatcgaaggcggcaagctg
gttgttgccctgaaaggcggcagcaacactggcctacgcgacgatgcgcaactgattggc
ttccacggcgacgccgccgcgcccactgctgtgctgctcaagcacaacggcctgcacttc
gaaatccaggtcgatgccagcaccccggtcggcagcaccgacgccgctggcgtcaaagac
atcctgatggagtcggcactgaccaccatcatggactgcgaagactcggttgcagccgtc
gacgctgacgacaaagtcatcgtctaccgcaactggctgggcttgatgaaaggcgacctg
gccgaaagcgtgagcaagggtggcaaaaccttcacccgcaccatgaacccggaccgcgag
tacgctgcgcctaacggcggcagcgtgaccctgcacggtcgttcgttgctgttcgtgcgc
aacgttggccacctgatgaccaacccggcgatcctcgatgcccagggcaacgaaatcccc
gaaggtatccaggacgggctgttcaccaacctgatcgccctgcacaatctcaacggtaac
actagccgcaagaatacccgcagcggcagcgtgtacatcgtcaagccgaagatgcacggc
cctgaggaagtggccttcgccgccgagatcttcagccaggtcgaagacctgctgggcatg
ccgcgcaacaccgtcaaggtcggcatcatggacgaggaacgccgtaccacggtcaacctc
aaatcctgcatcaaggcagccgccgagcgcgtggcgttcatcaataccggcttccttgac
cgcactggagatgaaatccacacctcgatggaagccggcgccgtggtgcgcaaaggtgcc
atgaagaacgagaagtggatcggcgcctacgaaaacaacaacgtcgacgttggcctggcc
accggcctgcaaggccgtgcgcagatcggcaaaggcatgtgggccatgcctgacctgatg
gccgccatgctcgagcagaagatcgcccacccactggccggtgccaacaccgcctgggta
ccgtcgccaactgccgccaccctgcacgccctgcactaccacaaggtggacgtacaggcg
cgccagcgtgaactggcttcacgtaccccggcgtcggtggatgacattctggccattccg
ctggctgccgacaccaactggtcggccgaagagatccgcaacgagctggacaacaacgcc
cagggcattctcggctacgtggtgcgctggatcgaccagggcgtgggttgctcgaaggtg
ccggacatcaacaacgtcggcctgatggaagaccgtgccaccctgcgcatctccgcccag
ctgctggccaactggctgcgccacggcgtggtcagccaggaacaggtgctggaaagcctc
aagcgcatggccgtggtggtcgatcagcagaacgctggcgaccccctgtaccgcccgatg
gcgccgaatttcgacgacaacgtggcgttccaggcggctgtggaactggtagtggaaggt
ggcaagcaaccgaacggttataccgagccggtactgcaccgccgtcgccgcgagttcaag
gcgcgtaacgggttgtaa
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