Pseudomonas putida BIRD-1: PPUBIRD1_3563
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Entry
PPUBIRD1_3563 CDS
T01975
Symbol
oprF
Name
(GenBank) OprF
KO
K03286
OmpA-OmpF porin, OOP family
Organism
ppb
Pseudomonas putida BIRD-1
Brite
KEGG Orthology (KO) [BR:
ppb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppb02000
]
PPUBIRD1_3563 (oprF)
Transporters [BR:
ppb02000
]
Other transporters
Pores ion channels [TC:
1
]
PPUBIRD1_3563 (oprF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprF
OmpA
OMP_b-brl
OmpW
TSP_3
Motif
Other DBs
NCBI-ProteinID:
ADR61156
LinkDB
All DBs
Position
complement(3987676..3988710)
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AA seq
344 aa
AA seq
DB search
MKLKNTLGLAIGSLVAATSIGAMAQGQGAVETEIFYKKEFFDSQRDFKNDGNLFGGSIGY
FLTDDVELRLGYDEVHNARGEDGKNIKGSNTALDAVYHFNNPYDAIRPYVSAGFSHQSLG
QTGRGGRDHSTFANVGAGAKWYITDMFYARAGVEAQYNIDQGDTEWAPSVGVGLNFGGSP
KQAEAAPAPVAEVCSDSDNDGVCDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDF
DKSVVKPNSYGDIKNLADFMKQYPQTTTVVEGHTDSVGPDAYNQKLSERRANAVKQVLTQ
QYGVESSRVDSVGYGETRPVADNATEEGRAVNRRVEAQVEAQAK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgaaaaacaccttgggcttggccattggttcgcttgtagccgccacttcgatt
ggcgctatggcacaaggtcaaggcgccgtcgagactgaaatcttctacaagaaagaattc
ttcgacagccagcgcgacttcaagaacgacggcaacctgttcggcggctcgatcggttac
ttcctgaccgacgacgttgagctgcgtctgggctacgacgaagtacacaacgctcgtggc
gaagacggcaagaacatcaagggctcgaacaccgccctggacgccgtttaccacttcaac
aacccgtacgacgccatccgtccgtacgtttccgctggtttctcgcaccagtcgctgggc
cagaccggccgtggcggtcgtgaccactccaccttcgccaacgttggcgctggcgccaag
tggtacatcaccgacatgttctatgcccgtgccggcgtagaagctcagtacaacatcgac
cagggcgacaccgagtgggccccgagcgttggtgttggcctgaacttcggcggtagcccg
aagcaagctgaagctgctcctgctccagttgctgaagtctgctccgactccgacaacgac
ggcgtgtgcgacaacgtcgacaagtgcccagacaccccggccaacgttaccgttgacgcc
gacggctgcccggctgttgccgaagtcgttcgcgttgagctggacgtcaagttcgacttc
gacaagtcggtcgtcaagcctaacagctacggcgacatcaaaaacctggctgacttcatg
aagcagtacccacaaaccaccaccgtggttgaaggtcacactgactccgtgggtccagac
gcttacaaccagaagctgtccgagcgtcgtgccaacgctgtcaagcaagtgctgacccag
cagtacggcgtagaatccagccgtgttgactcggttggctacggcgaaacccgtccggtt
gctgacaacgccaccgaagaaggccgtgctgtcaaccgtcgcgttgaagctcaggtagaa
gcccaggccaagtaa
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