KEGG   Polaribacter pectinis: H9W90_02115
Entry
H9W90_02115       CDS       T08187                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
ppec  Polaribacter pectinis
Pathway
ppec03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ppec00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    H9W90_02115 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppec03400]
    H9W90_02115 (uvrA)
DNA repair and recombination proteins [BR:ppec03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     H9W90_02115 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      H9W90_02115 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 RsgA_GTPase nSTAND1 DnaJ_CXXCXGXG nSTAND3 AAA_21 AAA_22 Viral_helicase1 AAA_24 cobW T2SSE AAA_25 AAA_18 DUF1924 MeaB
Other DBs
NCBI-ProteinID: QNM85938
UniProt: A0A7G9LBD9
LinkDB
Position
complement(443594..446416)
AA seq 940 aa
MKDQEYIEVYGARVHNLKNIDVKIPREKLVVITGLSGSGKSSLAFDTIYAEGQRRYIETF
SAYARQFLGGLERPDVDKIDGLSPVISIEQKTTNKSPRSTVGTITEIYDFLRLLFARAAD
AYSYNTNEKMVSYSDEQIKELILTDFADKKIAVLAPLIKSRKGHYRELFEQISKQGFLRV
RVDGKIQEIEKGMKLDRYKTHDIEVVIDRLAINESSEKRLDETIKTALYSGNNIMMVIDV
EDNNPRYFSRELMCPTTGIAYPNPEPNTFSFNSPKGACNSCNGLGITNEINLKKVIPDDS
ISIKNGGIVPLGEEKNSWIFKQLQNIAERYKFKLIDPINKIPKEALEIILNGGNESFEIE
SKTVGVTRNYKIDFEGIIAFIDSQYNNAESTSIKRWAKGFMDEVTCSTCNGKRLKKEALH
FKITDKNISDLAQLDVTELAKWFKNIEKDLSEKQLIIASEILKEIRTRIQFLLDVGLDYL
TLDRTSKSLSGGEAQRIRLATQIGSQLVGVLYILDEPSIGLHQRDNQKLIDSLVKLRDIG
NSVLVVEHDKDMMEHADFVFDIGPGAGRHGGEIVSAGTFEELKKQKTLTADYLTGRKEIA
VPKKRREGNGKFIKLKGATGNNLKNVSVEFPLGKMICVTGVSGSGKSTLINETLYPILNA
HIYRGVKKPMPYKKIEGLENVDKVIDIDQSPIGRTPRSNPATYTKTFDEIRSLFAKTPEA
AIRGYKPGRFSFNVKGGRCETCQGGGVRVIEMNFLPDVHVECETCQGKRFNRETLEIRYK
GKSISDILNMTIEDATDFFENIPKIHRKLKTIKDVGLGYITLGQQSTTLSGGEAQRIKLA
AELSKRDTGNTFYILDEPTTGLHFEDIRVLMEVLNKLANKGNTVLIIEHNLDVVKLADYI
IDVGMEGGKKGGKILCTGTPEEVSKHKTSYTAKFLKKELI
NT seq 2823 nt   +upstreamnt  +downstreamnt
ttgaaagaccaagaatatatagaagtttacggagcaagagtccataatttaaaaaatatt
gatgtaaaaatacctcgtgaaaaattagttgtaataactggtttaagcggaagcggaaaa
tcttctttagcatttgacactatttatgcggaaggacaaagacgttatattgaaacgttt
tctgcatatgctcgtcaatttttaggtggattagaaagaccagatgttgataaaattgac
ggactttctccagtaatttctattgaacaaaaaacgactaataaaagtccgcgttctaca
gttggtacaattacagaaatttacgatttcttacgattattatttgcaagagcagcagat
gcttactcttacaacaccaatgaaaaaatggtaagttattctgatgagcaaataaaagag
cttattttaactgattttgctgataaaaaaatagccgttttagcgccattaattaaatcg
agaaaaggacattatcgagaacttttcgaacaaatttctaaacaaggttttttacgagtt
agagttgatggaaagattcaagaaattgaaaaaggaatgaaattagatcgttacaaaact
catgatattgaggttgtaattgatagattggcaataaacgaatcatcagaaaaaaggtta
gacgaaaccataaaaactgcattatattctggtaataacattatgatggttattgatgtt
gaagataataatccaagatattttagtcgagaattaatgtgtccaacaacaggtattgca
tatccaaatccagaaccaaacacattttcttttaactcgccaaaaggcgcttgtaattct
tgtaatggtttaggaattaccaatgaaatcaacttaaaaaaagtaattccagatgatagt
atttctattaaaaatggaggaattgttcctttaggagaagaaaaaaatagttggattttt
aaacagcttcaaaatattgcagaacgctataagtttaaactcatagatccaataaataaa
attccgaaagaagctttagaaatcattttaaatggtggaaatgaatcttttgaaatagaa
tctaaaactgttggtgttactagaaattataaaatagattttgaaggtattatagctttt
atagatagccaatataacaacgcagaaagcacatcaataaaaagatgggcaaaaggtttt
atggacgaagttacttgttctacttgtaacggaaaacgtttaaaaaaggaggctttacac
tttaaaattactgataaaaatattagtgatttagcacaattagatgttactgaattagct
aaatggttcaaaaatattgagaaagatttatcagaaaaacaattgataattgcttcagaa
atattaaaagaaattcgcactcgtattcagtttttgttagatgtaggtttagattattta
acgttagatagaacgtcaaaatcgctctctggtggtgaagcgcaaagaattcgtttggca
acacaaattggttctcaattagttggtgttttatatattttggatgaaccaagtattggt
ttacatcaacgagacaatcaaaaactaatagattctttagtaaaattacgcgatatcgga
aactctgttttagttgtagaacatgacaaagatatgatggaacacgcagactttgtcttt
gatattggccctggagctggtagacatggaggagaaattgtttctgctggaacttttgaa
gaattaaaaaaacaaaaaactttaactgcagattatttaacaggaagaaaagaaatagca
gttcctaaaaaacgtcgtgaaggaaatggaaaattcatcaaactaaaaggcgctacaggt
aataatttaaaaaatgtttctgttgaatttcctttaggaaaaatgatctgtgtaacagga
gtttccggaagtggaaaatcaacattaataaacgaaactttatacccaattttaaatgct
catatttatagaggagttaaaaaaccaatgccttacaagaaaattgaaggtttagaaaat
gtagataaagttattgatattgaccaatctccaattggaagaacaccacgttctaaccca
gcaacctataccaaaacttttgatgaaattagaagtttatttgcaaaaactccagaagct
gcaattcgtggctataaacctgggcgcttttcttttaatgtaaaaggcggacgttgcgag
acttgccaaggtggaggagttcgtgtcatagaaatgaactttttaccagacgttcatgta
gaatgtgaaacttgccaaggaaaacgtttcaatagagaaactttagaaattcgttataaa
ggaaaatctatttcagacattttaaatatgacgattgaagacgcaactgatttctttgaa
aacattcctaaaattcataggaaacttaaaacaataaaagatgttggtttgggttatatt
acacttgggcaacaatctaccacactttctggtggagaagcgcaaagaataaaactagct
gcagaattatctaaaagagacacaggaaatacattttatattttagatgaacctacaact
gggcttcattttgaagatattcgagttttaatggaagttctaaataaacttgctaacaaa
ggtaatactgtcttaattatagaacacaatttagatgtagtaaaattggcagattacatt
atagatgttggtatggaaggtggaaaaaaaggtggaaaaattttatgtacaggaacacca
gaagaagtttctaaacataaaacgagttatacagccaagtttttgaaaaaagaattaatt
tag

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