Polaribacter pectinis: H9W90_02115
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Entry
H9W90_02115 CDS
T08187
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
ppec
Polaribacter pectinis
Pathway
ppec03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H9W90_02115 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppec03400
]
H9W90_02115 (uvrA)
DNA repair and recombination proteins [BR:
ppec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H9W90_02115 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H9W90_02115 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
RsgA_GTPase
nSTAND1
DnaJ_CXXCXGXG
nSTAND3
AAA_21
AAA_22
Viral_helicase1
AAA_24
cobW
T2SSE
AAA_25
AAA_18
DUF1924
MeaB
Motif
Other DBs
NCBI-ProteinID:
QNM85938
UniProt:
A0A7G9LBD9
LinkDB
All DBs
Position
complement(443594..446416)
Genome browser
AA seq
940 aa
AA seq
DB search
MKDQEYIEVYGARVHNLKNIDVKIPREKLVVITGLSGSGKSSLAFDTIYAEGQRRYIETF
SAYARQFLGGLERPDVDKIDGLSPVISIEQKTTNKSPRSTVGTITEIYDFLRLLFARAAD
AYSYNTNEKMVSYSDEQIKELILTDFADKKIAVLAPLIKSRKGHYRELFEQISKQGFLRV
RVDGKIQEIEKGMKLDRYKTHDIEVVIDRLAINESSEKRLDETIKTALYSGNNIMMVIDV
EDNNPRYFSRELMCPTTGIAYPNPEPNTFSFNSPKGACNSCNGLGITNEINLKKVIPDDS
ISIKNGGIVPLGEEKNSWIFKQLQNIAERYKFKLIDPINKIPKEALEIILNGGNESFEIE
SKTVGVTRNYKIDFEGIIAFIDSQYNNAESTSIKRWAKGFMDEVTCSTCNGKRLKKEALH
FKITDKNISDLAQLDVTELAKWFKNIEKDLSEKQLIIASEILKEIRTRIQFLLDVGLDYL
TLDRTSKSLSGGEAQRIRLATQIGSQLVGVLYILDEPSIGLHQRDNQKLIDSLVKLRDIG
NSVLVVEHDKDMMEHADFVFDIGPGAGRHGGEIVSAGTFEELKKQKTLTADYLTGRKEIA
VPKKRREGNGKFIKLKGATGNNLKNVSVEFPLGKMICVTGVSGSGKSTLINETLYPILNA
HIYRGVKKPMPYKKIEGLENVDKVIDIDQSPIGRTPRSNPATYTKTFDEIRSLFAKTPEA
AIRGYKPGRFSFNVKGGRCETCQGGGVRVIEMNFLPDVHVECETCQGKRFNRETLEIRYK
GKSISDILNMTIEDATDFFENIPKIHRKLKTIKDVGLGYITLGQQSTTLSGGEAQRIKLA
AELSKRDTGNTFYILDEPTTGLHFEDIRVLMEVLNKLANKGNTVLIIEHNLDVVKLADYI
IDVGMEGGKKGGKILCTGTPEEVSKHKTSYTAKFLKKELI
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagaccaagaatatatagaagtttacggagcaagagtccataatttaaaaaatatt
gatgtaaaaatacctcgtgaaaaattagttgtaataactggtttaagcggaagcggaaaa
tcttctttagcatttgacactatttatgcggaaggacaaagacgttatattgaaacgttt
tctgcatatgctcgtcaatttttaggtggattagaaagaccagatgttgataaaattgac
ggactttctccagtaatttctattgaacaaaaaacgactaataaaagtccgcgttctaca
gttggtacaattacagaaatttacgatttcttacgattattatttgcaagagcagcagat
gcttactcttacaacaccaatgaaaaaatggtaagttattctgatgagcaaataaaagag
cttattttaactgattttgctgataaaaaaatagccgttttagcgccattaattaaatcg
agaaaaggacattatcgagaacttttcgaacaaatttctaaacaaggttttttacgagtt
agagttgatggaaagattcaagaaattgaaaaaggaatgaaattagatcgttacaaaact
catgatattgaggttgtaattgatagattggcaataaacgaatcatcagaaaaaaggtta
gacgaaaccataaaaactgcattatattctggtaataacattatgatggttattgatgtt
gaagataataatccaagatattttagtcgagaattaatgtgtccaacaacaggtattgca
tatccaaatccagaaccaaacacattttcttttaactcgccaaaaggcgcttgtaattct
tgtaatggtttaggaattaccaatgaaatcaacttaaaaaaagtaattccagatgatagt
atttctattaaaaatggaggaattgttcctttaggagaagaaaaaaatagttggattttt
aaacagcttcaaaatattgcagaacgctataagtttaaactcatagatccaataaataaa
attccgaaagaagctttagaaatcattttaaatggtggaaatgaatcttttgaaatagaa
tctaaaactgttggtgttactagaaattataaaatagattttgaaggtattatagctttt
atagatagccaatataacaacgcagaaagcacatcaataaaaagatgggcaaaaggtttt
atggacgaagttacttgttctacttgtaacggaaaacgtttaaaaaaggaggctttacac
tttaaaattactgataaaaatattagtgatttagcacaattagatgttactgaattagct
aaatggttcaaaaatattgagaaagatttatcagaaaaacaattgataattgcttcagaa
atattaaaagaaattcgcactcgtattcagtttttgttagatgtaggtttagattattta
acgttagatagaacgtcaaaatcgctctctggtggtgaagcgcaaagaattcgtttggca
acacaaattggttctcaattagttggtgttttatatattttggatgaaccaagtattggt
ttacatcaacgagacaatcaaaaactaatagattctttagtaaaattacgcgatatcgga
aactctgttttagttgtagaacatgacaaagatatgatggaacacgcagactttgtcttt
gatattggccctggagctggtagacatggaggagaaattgtttctgctggaacttttgaa
gaattaaaaaaacaaaaaactttaactgcagattatttaacaggaagaaaagaaatagca
gttcctaaaaaacgtcgtgaaggaaatggaaaattcatcaaactaaaaggcgctacaggt
aataatttaaaaaatgtttctgttgaatttcctttaggaaaaatgatctgtgtaacagga
gtttccggaagtggaaaatcaacattaataaacgaaactttatacccaattttaaatgct
catatttatagaggagttaaaaaaccaatgccttacaagaaaattgaaggtttagaaaat
gtagataaagttattgatattgaccaatctccaattggaagaacaccacgttctaaccca
gcaacctataccaaaacttttgatgaaattagaagtttatttgcaaaaactccagaagct
gcaattcgtggctataaacctgggcgcttttcttttaatgtaaaaggcggacgttgcgag
acttgccaaggtggaggagttcgtgtcatagaaatgaactttttaccagacgttcatgta
gaatgtgaaacttgccaaggaaaacgtttcaatagagaaactttagaaattcgttataaa
ggaaaatctatttcagacattttaaatatgacgattgaagacgcaactgatttctttgaa
aacattcctaaaattcataggaaacttaaaacaataaaagatgttggtttgggttatatt
acacttgggcaacaatctaccacactttctggtggagaagcgcaaagaataaaactagct
gcagaattatctaaaagagacacaggaaatacattttatattttagatgaacctacaact
gggcttcattttgaagatattcgagttttaatggaagttctaaataaacttgctaacaaa
ggtaatactgtcttaattatagaacacaatttagatgtagtaaaattggcagattacatt
atagatgttggtatggaaggtggaaaaaaaggtggaaaaattttatgtacaggaacacca
gaagaagtttctaaacataaaacgagttatacagccaagtttttgaaaaaagaattaatt
tag
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