Pyricularia pennisetigena: PpBr36_03631
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Entry
PpBr36_03631 CDS
T08194
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ppei
Pyricularia pennisetigena
Pathway
ppei03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ppei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PpBr36_03631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppei03400
]
PpBr36_03631
Enzymes [BR:
ppei01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
PpBr36_03631
DNA repair and recombination proteins [BR:
ppei03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
PpBr36_03631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
RNA_ligase
DNA_ligase_A_C
BRCT
LIG3_BRCT
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
40733107
NCBI-ProteinID:
XP_029753263
LinkDB
All DBs
Position
3:6905822..6908936
Genome browser
AA seq
1001 aa
AA seq
DB search
MSRIKREDASQEAIDEDSLQYSFGDAGSGEVDEKYPNRPRNHSQTLVFSELFTNLFNPLN
EHKNRRGPVGPAGRKGGPRLSPHEQRRLIIRRFIDRWRAEVGNDFYPALRLILPDKDRDR
GVYGLKESAIGKLLVKLIKIAPGSEDGQNLLKWKLPGQTFASRMAGDFAGRCFETLSKRQ
LRMAPGDMRIGEVNSLLDKLAAASGEGEQLPIFQTFYERMNAEEMMWLIRMILKDMKIGA
SERTFLYQWHPDAEALFNVSSSLRRVCWELYDPALRLEQEDTRVTLMQCFQPQLAQFQPH
SPNFATMVQDLGVTDEDPRFWIEEKLDGERMQLHMVDDDDHPGGKRFSFWSRKGKDYTYL
YGNGFQDDNSALTRHLSDAFDPRVSNLILDGEMVTWDPKIDKMVPFGTLKTAALLGQKTP
FDNTNERPLFRIFDILYLNDTALTKNSLQDRRKALATVVRDVHRRLEIHPYEEATSADAI
EPLLRKVVADSSEGLVLKNPRSVYRLNSRNNDWIKVKPEYMSEFGESLDCVVIGGYYGSG
HRGGTISSFLCGLRVGENHIRAGANPEKCISFFKVGGGFKAEDYAQIRHATEGKWMDWDP
KKPPSEFIELGGGEKYQYERPDVWIRPRDSVVVSVKAASIGVSPQFAMQITLRFPRFRRL
RTDRSWDSALDVDGFNKLKEDAEHQAKEKKEMKIEDRKRRPQKRARREILIAGQDPDTVM
AGEKPAAGQTQTSQTKSVFEGLNFCVMTDCVKPVRKTKAQLESLIKAHGGTLSQQTNPQP
RKHLIADKNGIKVASLLKRDSEVDIIRPNWILDCLDQDGVEFLLPIEEKHLFNASEATKR
TAESQVDEYGDSYMRTIGVEELKDIAEGIPKFEYTDSFDVDGFLDDLESAGCEMAGSGFV
FRRCVVHVDGVAGTPKHRLDVLRNYIRFGGGAILDNMKSQGLTHVVVVGDPDEGAASREL
AAEMRHHMSLIRRLPRLVTQQWVYESWKEKTLLDEEAYVPL
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgaattaaacgggaagacgcgtcccaggaggccattgacgaagattccctgcaa
tacagctttggtgatgccggctcgggagaagtcgatgagaaataccctaatcgtccccgg
aatcactctcagacactggtcttttccgaactgttcacgaatctgttcaaccccctgaat
gagcacaagaatcgaagaggccccgttggtcctgcaggccgcaagggtggcccgagactc
tctcctcacgaacaaagacgcctcatcatcaggcgcttcatcgaccgctggcgggccgag
gttgggaatgatttctacccagctctgcgcctgatattacccgacaaggaccgcgatcgt
ggtgtctacggcctcaaggagagcgcaatcggaaagcttctagtgaagttgatcaagatc
gcaccaggctcggaggatggccaaaacctcctcaaatggaaactcccgggccagactttt
gccagccgcatggcgggtgattttgccggaagatgctttgaaacactatccaaaagacag
ctgcgcatggcgccgggggatatgcgtattggagaagtcaactcgctgctcgacaaactg
gcagccgcttcaggcgagggcgagcagctgcccatttttcaaaccttctatgagcgcatg
aacgcagaggagatgatgtggctcattcgcatgatcctcaaggacatgaagatcggtgca
agcgagcgtacctttctgtatcagtggcacccagacgccgaggctcttttcaacgtcagc
tccagcttgcgccgtgtgtgctgggagctctatgatcccgctctccgtctagagcaggaa
gacaccagagtgacgctgatgcaatgctttcagccccaattggctcagtttcagcctcac
tcacccaactttgctacaatggtccaagacctaggcgtcactgacgaagacccgagattc
tggatcgaggaaaagctcgatggcgagcggatgcaattacacatggtagatgacgacgat
catccaggaggcaaacgtttctctttctggtctcgaaagggcaaggactacacctatctc
tacggtaatggatttcaagatgacaactccgcactgacccggcatttatccgatgctttc
gaccctcgagtttccaatctgatcttggacggcgagatggtcacttgggatccaaagatc
gacaagatggtgcctttcggtacactcaagacggccgccttgcttggccaaaagacacca
ttcgacaacacaaacgagcggcccctctttcgcatcttcgacatactgtacctgaatgac
acagctctgaccaagaactcgttgcaagatcgccgcaaggcgctagccacagttgtccgt
gatgtccatcgtaggctcgaaattcatccctacgaggaagcaacttctgccgatgccatc
gagccgttgttgcgcaaggttgtagctgactcgtcggagggtcttgtgctgaagaatcca
agatcagtctatcgtctgaacagtcggaataatgattggatcaaagtgaaaccagagtac
atgtccgagtttggcgagtcactggactgtgtggtcattggcggctactacggctcagga
catcggggcggcaccatctccagttttctttgcggcctcagggttggcgaaaaccacatc
agggccggggccaatccagaaaagtgcatcagttttttcaaggtgggcggtggcttcaag
gccgaggactatgcgcagatccgccatgcaacagagggaaaatggatggactgggaccca
aagaaacccccaagcgagtttattgagctcggtggcggcgaaaagtaccagtacgaacgg
cctgacgtttggatacgaccaagagactcggttgttgtctcggtcaaggcggccagcatc
ggtgtatcccctcagttcgccatgcagattaccctccgctttcccagattccgccggctg
cggaccgataggtcgtgggactctgctctggatgtagacggcttcaacaagctcaaagaa
gatgccgagcatcaagccaaggagaagaaggaaatgaagattgaggatcggaagcgcagg
ccgcagaagagggccaggcgcgaaatattgattgctggacaggatccagatacggtcatg
gcaggtgaaaagcccgcagctggccagacacagacaagccagacaaagagcgtgtttgaa
ggtttgaatttttgtgtcatgactgactgcgtcaaacccgttagaaagaccaaagctcag
ctcgagtctttgataaaagcccatggcggaacactctcccaacagacgaacccccaacct
agaaagcacctgattgcggataaaaatggcatcaaggtggcgagccttctcaagcgtgac
agcgaagtggacattatcaggccgaactggatcttggactgtcttgatcaagacggcgtg
gagttcctcctgcccatcgaagagaagcatctcttcaatgcttcggaagctaccaagcgg
actgcggagtcccaggtggatgagtatggcgatagctacatgcgcactataggcgttgaa
gagttgaaggatatcgcagagggcattcccaagtttgaatacacagacagctttgacgtc
gacgggttcctagacgacttggaatcggcagggtgtgagatggcgggatctgggttcgta
ttcagacgctgcgtagtgcacgttgatggtgtagctgggacgccaaagcaccgcctcgac
gtgctgcgaaactacatccgctttggcggcggggccatattggacaatatgaagtcgcaa
ggtctcacgcatgtcgtggtggtgggcgatcctgatgagggggcggcttccagggagttg
gcagctgagatgaggcaccacatgagcctgatacgacggctaccgaggctggtcacgcag
cagtgggtttatgagagctggaaggagaagactttgctagacgaggaggcatatgtgccg
ttatga
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integrated database retrieval system
