Pyricularia pennisetigena: PpBr36_07182
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Entry
PpBr36_07182 CDS
T08194
Name
(RefSeq) hypothetical protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
ppei
Pyricularia pennisetigena
Pathway
ppei03022
Basal transcription factors
ppei03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppei00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PpBr36_07182
09124 Replication and repair
03420 Nucleotide excision repair
PpBr36_07182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppei03021
]
PpBr36_07182
03400 DNA repair and recombination proteins [BR:
ppei03400
]
PpBr36_07182
Transcription machinery [BR:
ppei03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PpBr36_07182
DNA repair and recombination proteins [BR:
ppei03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PpBr36_07182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Tfb4
Motif
Other DBs
NCBI-GeneID:
40736625
NCBI-ProteinID:
XP_029748779
LinkDB
All DBs
Position
1:2064103..2065758
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AA seq
521 aa
AA seq
DB search
MADSDGELVVDDGSDDELVGQSGGARGAAGGGRSGKGGVEGGKRKKKASKAAWEDLQRSW
DVVHELDDGNLSLEGFLEAEKRRRVLRDTTPIQRGIIRHLVLVIDMSFAMAEKDLMPTRH
RLTISYAIDFVREYFDQNPISQLAIVGMRDSIAVRISDLSGNPAEHIEKLRALPDLDPSG
SPSLQNALEMCRGALFNTPSHGTREVVIIFGALLSLDPGDIHETIDGLMADRIRVSVIGL
AAQVYICEEICRRTNSGKAAADLGIVTDTDGSAYNVALHEVHFRELLMSATRPPITRQSQ
LQQATGEAASLLMMGFPSRKTDKDPALCSCHNRPVRNGFLCTRCGSRVCRLPSECPACGL
TLILSTHLARSYHHLFPLRVWTEVPWADAGRSVSCFACHAPFPDVKNKDKNKDADKSKNA
EKEGAGDKHLKVPSKDVNGKKKKPAPPVPKGVSESGRYMCQVCRHHFCIDCDVFSHEVLH
NCPGCQSDTRGDLAATNGKGATNGAASNGVSQDSNGAMVID
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcagactcggatggcgagcttgtggtcgacgacggctctgatgacgaacttgttggg
cagtcgggtggcgcacgcggtgcagccggcggggggcggtcgggcaagggcggggttgag
ggtggcaagcgcaagaagaaagccagcaaggcggcatgggaagatctacaaagatcatgg
gatgtggtccacgagctggatgatggtaacctctctctggagggctttctcgaggccgag
aagcgtcggcgcgtgctccgtgacacgacgcccatccagcgtggaatcatacggcacctg
gtcttggtcatagacatgtcctttgccatggcggagaaggacctgatgccgacgaggcac
cgcctgaccatctcgtacgccatcgattttgtacgtgagtactttgaccagaaccccatc
agccagctggccatcgtgggcatgcgcgacagcatagccgttcggatctcggatttgagc
gggaatccggcggaacacattgagaagctcagggcgttgccggacctagacccttctgga
agccctagtctacagaacgctctagagatgtgccggggcgcattgttcaacaccccctca
cacggaacccgggaggtggtcataatattcggcgcattattatcactcgatcccggcgac
atacatgagacgattgatgggctcatggccgacaggatacgagtgtcggtgattgggcta
gcagcccaagtctatatctgcgaggaaatatgtcgaagaacaaactctggcaaggcggcg
gcagatctaggaattgttacagacaccgacggatcggcatacaacgtagctctccacgag
gtgcactttcgggagctgctgatgtcggctacgagacccccgataacacggcaaagccaa
ctccaacaggcaacgggagaggctgcttccctcctaatgatgggctttccctcgcgaaag
acggacaaggaccccgctctgtgttcatgtcataatcgacctgtgcgaaacggcttcctg
tgcacacgatgtggatcaagggtttgtcgtctgccctccgagtgccccgcatgcggcctg
acgctgatattgtccacgcacctggcccgatcgtaccaccacctcttcccgctgagggta
tggaccgaagtgccatgggccgacgccggtcgcagcgtctcctgctttgcatgccacgca
ccgttccccgatgtcaagaataaggacaagaacaaagatgcggacaagagcaagaacgct
gagaaggagggtgccggcgacaaacacctcaaggttcccagcaaggatgtgaacggcaaa
aagaagaaacccgcaccacctgtgcccaaaggtgtgagtgagagcgggagatatatgtgt
caggtgtgtcggcatcacttctgtattgattgcgacgtattttcccatgaggtgctacac
aactgccctggatgccagagcgatactcgaggcgacctagctgcgacgaacggcaaagga
gccaccaacggagctgctagcaatggtgtttcccaggattccaacggggccatggtgatt
gactga
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