Pediococcus pentosaceus SL4: T256_06425
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Entry
T256_06425 CDS
T02906
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ppen
Pediococcus pentosaceus SL4
Pathway
ppen00470
D-Amino acid metabolism
ppen00550
Peptidoglycan biosynthesis
ppen01100
Metabolic pathways
ppen01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ppen00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
T256_06425
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
T256_06425
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
T256_06425
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppen01011
]
T256_06425
Enzymes [BR:
ppen01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
T256_06425
Peptidoglycan biosynthesis and degradation proteins [BR:
ppen01011
]
Precursor biosynthesis
Amino acid ligase
T256_06425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
RimK
CPSase_L_D2
ATP-grasp_4
ATP-grasp
GARS_A
Motif
Other DBs
NCBI-ProteinID:
AHA05381
LinkDB
All DBs
Position
complement(1257659..1258714)
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AA seq
351 aa
AA seq
DB search
MKIAVLAGGKSTERNVSLSSGSKITNALRSKGYDATMIDLFLGYELEDGQSYEDVFKSSN
TSTDYEISDAVLTEEDIEELRTDGTVGLFGKNVLPILQAADFVFLALHGGDGENGKVQAV
LDLNHIKYTGSGSLASGIAMDKAISKEIMLYNNIKTAQFAVLHAKDGIHPQLAFDYPMVV
KPNSGGSSIGTRIVHDEAELAESLKDAYRFDDEIIVEEFITGREFSLGVVNGQAMPAIEI
VVNDGWYDYEHKFQTGSTTKFVTPPEIEDDVHDEMKRVAVQTMDALGMTNYGRVDFLTND
TGVYVIEANNLPGMTPLSLLPQEAEAAGISYEDLCESIVLGKQKLYDELKK
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgctgtacttgccggtgggaaaagcacggaaagaaacgtgtcgctttcatct
ggttcaaagatcaccaatgctttgcgatcaaaaggttacgatgcaacgatgattgattta
ttcttgggatatgaacttgaggatggtcaaagttatgaagacgtatttaagtctagtaat
accagtactgattatgaaatcagtgacgcagttttaacagaagaagatattgaagaactt
cgtacagacggtacggttggattgtttgggaaaaatgttttaccaatcctccaagctgct
gactttgtttttctagcgttacatggtggtgatggtgagaacggtaaagttcaagctgtt
ttggatcttaatcatattaaatatacaggtagtggttcactagcttcaggaattgccatg
gataaagcaatttcaaaagagattatgttgtataacaacattaaaacagcccaatttgct
gtattgcatgcaaaagatggtattcatcctcaattagcctttgactatccaatggttgtt
aagcctaatagtggtggttcaagtattggtactagaattgtacatgatgaagccgaacta
gctgaatcattaaaggatgcctatcgttttgatgatgaaattattgttgaagaatttatc
actggacgtgaattttcactaggagtggtaaatggtcaagcaatgccagcaattgaaatt
gtggtaaatgatggttggtacgattatgaacataaatttcaaacgggttcaacgactaaa
ttcgttactcctccagaaatcgaagatgatgttcatgatgaaatgaaaagggtagctgtt
caaacaatggatgccttgggcatgactaactatggacgcgttgattttctaactaacgac
acaggcgtatatgtaatcgaagccaataaccttccaggaatgacacctctatcgttatta
ccacaagaagcagaagcagctggtattagttatgaggacctttgtgaaagtatcgtatta
ggcaagcaaaagctttacgatgaattaaaaaaataa
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