Prunus persica (peach): 18771779
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Entry
18771779 CDS
T03092
Name
(RefSeq) THO complex subunit 1 isoform X2
KO
K12878
THO complex subunit 1
Organism
pper
Prunus persica (peach)
Pathway
pper03013
Nucleocytoplasmic transport
pper03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18771779
09122 Translation
03013 Nucleocytoplasmic transport
18771779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18771779
03041 Spliceosome [BR:
pper03041
]
18771779
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
18771779
Spliceosome [BR:
pper03041
]
Complex C
Other components
EJC/TREX
18771779
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
18771779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
18771779
NCBI-ProteinID:
XP_007204592
UniProt:
M5VXG9
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All DBs
Position
G7:767630..781393
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AA seq
604 aa
AA seq
DB search
MEVFRRAILQPGPPENFALQTVQQVIKPQKQTKLVQDENQLLENILRTLLQELVSGEQIM
QYGQSIDDGETTQGHIPRLLDIVLYLCENEHIEGGMIFQLLEDLTEMSTMRNCKDVFGYI
ESKQDILGKPELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSERSAVN
IKGVFNTSNETKYEKDPPDGISIDFNFYKTFWSLQEHFCNPPSLTLAPTKWKKFTSGLMV
VLNTFEAQPLSDEEGDANSLEEEAANFSIKYLTSSKLMGLELKDPSFRRHILVQCLILFD
YLKAPGKSEKDLPSDSMKEEIKSCEERVKKLLEMTPPKGENFLHKIEHILEREKNWVWWK
RDGCPPFEKQPAEKKVVQEGAKKRRPRWRMGNKELSLLWKWADQNPNALTDPQRVRTPAI
TDYWKPLADDMDPAAGIEAEYHHKNNRVYCWKGLRFSARQDLEGFSRFTEFGIEGVVPLE
LLTPEERSKYQAKPNDKSKRAKKEETKGAAHQVEENQIATAANEIDGEGIRAVLEASVTP
TDTDATVATGDMSQGGSPIPDEHQKQSSDTDVGQEAGQMEADAEVEAGMIDGGMDTEVDL
DPVG
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgttcaggagagccatattgcaacctggcccaccagaaaattttgctctacag
acagttcaacaagttataaaacctcagaaacagacaaagttagtccaagatgagaatcaa
ttgttagaaaatatcctccggacattgcttcaggaactggtgtctggggagcagataatg
cagtatggtcaatcaattgatgatggagaaactacccaaggacatattccacgtcttctt
gatattgtgttgtatctttgtgagaacgaacacattgaaggcggcatgatatttcagctg
ttggaagacttaacagaaatgtctactatgagaaactgcaaagacgtttttggttatata
gagagtaaacaagatatattaggaaagccagagctttttgctcgaggaaaacttgtgatg
ttgagaacatgcaatcaacttcttcgtcgcctgtcaaaggcaaatgatgtggtattttgt
ggacgaattctaatgtttttggctcattttttcccattatctgagcgttcagctgtgaat
ataaaaggagtttttaacacatcaaacgagacaaaatatgagaaagacccccctgatgga
atttccatcgatttcaacttctacaagacattttggagtttacaggaacacttttgtaac
cctccttccttaactcttgctcctaccaagtggaagaaatttacatccggtttaatggtt
gtcctgaatacatttgaagctcaaccattaagtgatgaagagggagatgccaatagtttg
gaggaggaggcggcaaatttcagcataaaatatcttacgagcagtaaactaatgggtttg
gagttgaaggatccgagtttccgacgtcatattcttgtgcagtgcctcatattgtttgat
tatctgaaggcccctggaaagagtgaaaaagatttgccttccgatagcatgaaagaggaa
ataaaatcttgtgaggagcgtgtgaaaaagctgcttgaaatgactccacccaagggggag
aattttcttcataaaattgagcatatattagaacgtgaaaagaattgggtatggtggaaa
cgtgatggttgtccaccatttgagaagcagccagcagagaagaaagtggtccaagaagga
gccaaaaagcgtaggccgagatggagaatgggaaataaagagctctctctgttgtggaag
tgggcagatcaaaatccgaatgctttaactgatcctcaacgtgttcgaacacctgccatc
actgattactggaagcccctggctgacgatatggatccagcagctggaatagaagctgaa
tatcaccacaaaaataaccgagtttattgctggaaaggtcttcgattttcagctagacaa
gacttggaagggttttctagatttactgaatttggtattgaaggagtagtgcctctggaa
cttttgacacctgaagagcggtctaaataccaagctaaaccaaatgacaagtctaaacgt
gctaaaaaggaagaaacaaagggtgctgcacatcaagtagaagaaaatcagattgcaaca
gctgcaaatgagatagatggtgaaggaatcagggctgtgcttgaagcctcagtgacacca
acggacactgatgccactgttgcaactggtgacatgtcccaaggtggcagtccaatcccc
gatgaacatcagaagcaaagctctgatacggatgtaggtcaagaggcaggccagatggaa
gcagatgctgaagtcgaggctgggatgattgatggtggaatggacacggaggttgattta
gatccagttggctga
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