Prunus persica (peach): 18775827
Help
Entry
18775827 CDS
T03092
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pper
Prunus persica (peach)
Pathway
pper03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18775827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pper03041
]
18775827
Enzymes [BR:
pper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
18775827
Spliceosome [BR:
pper03041
]
Complex A
U2 snRNP components
U2 related factors
18775827
Complex B
18775827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
FeoA
Motif
Other DBs
NCBI-GeneID:
18775827
NCBI-ProteinID:
XP_020419281
LinkDB
All DBs
Position
G5:511389..528518
Genome browser
AA seq
1159 aa
AA seq
DB search
MEEGKHKSRKEGESKRSHRDRQREKQRNGERHRDKDKDKRDRDSRRSEREKSSDSEDRYD
REKHRDRDTDRTRSRDDERERTRDRKREKDKEKEKERERAREKEKEREREREREREREKE
RDREKEREKEKEKERERERERREREREGEDREREKREREREREKDRDRERRIRERERRRD
IDTDDTDDDVRERGRKRHRKDENEYKEKERERSSSRSNRHRDDGDGSPRKKSDEDDSVKK
EKQPTREEELEDEQRKLDEEMEKRRRRVQEWQELKRKKEESEREKRGEGDVDEPKSGKAW
TLEGESDDEEVPSLGKSERDMDVDGEDNLTDREAGGDAMVVDSENETDALTLQNGADDAV
GDEEVDPLDAFMNSMVLPEVEKLNNAVEPSIVDEKNKDKKDDLSNGEQPRRGSNKSMGRI
IPGEDSDSDYGDLENDDDPLEDEGDDEFIKRVKKTKAEKLSVVDHSKIDYDPFRKNFYIE
VKEISRMTPEQVGAYRKELELKIHGKDVPKPIKTWHQTGLTSKILETIKKLNYEKPMPIQ
AQAVPVIMSGRDCIGIAKTGSGKTVAFVLPMLRHIKDQPPVVAGDGPIGLIMAPTRELVQ
QIHSDIKKFTKVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSGGRITN
LRRVTYLVVDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEVLARKVLNKPV
EIQVGGRSVVNKDIAQLVEVRLENERFLRLLELLGEWYEKGKILIFVESQNKCDALFRDL
LRHGYPCLSLHGGKDQTDRESTITDFKSNVCNLLIATSVAARGLDVKELELVINFDSPNH
YEDYVHRVGRTGRAGRKGCAITFVSEEDARYAPDLVKALELSEQVVPDDLKSLADSFTAK
VNQGLEQAHGTGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEDDKSDSEDEDEGIRKAGG
DISQQAALAQIAAIAAASKGSTASIQTPVPAAQLLPNSGLPVSLPGVLGLTLPGTAAAVA
GTGLPVVGNDGAARAAAIAAAMNLQHNLAKIQADAMPEHYEAELEINDFPQNARWKVTHK
ETLGPISEWTGAAITTRGQYFPPGKVAGPGDRKLYLFIEGPTEQSVKRAKAELKRVLEDI
SNQALSLPGGAQQGRYQVL
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggaagagggcaagcataaatccaggaaggagggggaatccaagaggagtcatcgagat
cggcaacgtgaaaaacagaggaatggagagagacacagggataaagataaagataagaga
gatcgtgatagtcggcgctctgagagagaaaagagttctgattctgaggataggtatgat
agagagaagcatcgagacagggacactgataggacacgaagccgggatgatgaaagagag
agaacgagagacaggaagagagaaaaagataaagagaaggagaaggagagagagagggct
agagagaaggaaaaggagagggagagggaaagagaaagagaaagagaaagagaaaaagaa
agagatagagagaaagaaagagaaaaagaaaaagaaaaggaacgagaaagagagagggag
agaagggaacgagaaagagagggagaagatagagagagggaaaagagggagcgagagagg
gagagggaaaaggacagagatcgagagaggaggatacgggagagggagaggcgtagggac
attgatactgatgatactgatgatgatgttagggagcgtggtaggaagcggcataggaaa
gatgaaaatgagtacaaggagaaagagagggaaaggagtagcagcaggtcaaacagacat
agggatgatggagatgggagcccgagaaagaagagtgatgaagatgattcagttaagaaa
gagaagcagccaactcgtgaggaggagttagaggatgaacagcggaaattggatgaggaa
atggaaaagcggagaaggagagttcaggagtggcaagagttaaaaaggaagaaggaagaa
tctgagagagagaaacgtggggaaggggatgttgatgaacctaagtccggcaaggcctgg
actcttgaaggagaatctgatgatgaagaagtaccctcattagggaaatcagagagggat
atggatgttgatggagaagacaatcttactgacagagaagctggcggagatgctatggtg
gtagattctgagaatgaaacagatgcacttactttgcagaatggggctgatgatgctgtt
ggtgatgaagaagttgatccattagatgcttttatgaattctatggtgttgcctgaagtt
gagaagctgaacaatgctgtggaaccatcaattgttgatgagaagaacaaggataaaaag
gatgatctaagtaatggtgaacagccaaggagaggttcaaataaatctatgggcagaata
attcctggggaggattctgactcggattatggggaccttgagaatgatgatgacccctta
gaagatgaaggtgatgatgagttcataaaaagggtgaaaaagacaaaagctgagaagctc
tctgtagttgatcactctaagatagattatgatccattccgcaaaaatttctatattgag
gtgaaggagatctctagaatgactccagaacaggtgggtgcatatcggaaagaattggaa
ttgaaaatacatggtaaggatgtgccaaagccgatcaagacatggcaccaaactgggctt
acaagtaaaatcttggaaacaataaagaagctaaactatgaaaagccaatgccaattcag
gctcaggcagtgcctgtaattatgagtggtcgagattgtattggcatcgcaaaaactggg
tcaggcaaaactgttgcattcgtgctgccaatgctgaggcatatcaaggaccagccacct
gtggtagcaggagatggacctattgggcttataatggcaccaactagggagcttgttcag
cagattcacagtgatattaaaaagtttaccaaggtactgggtctcaggtgtgtgcctgtg
tatggaggttctggtgttgcccaacaaattagtgaattgaagaggggagctgaaattgtt
gtctgtacacccggtaggatgattgacatactttgtacaagtggagggagaataacaaat
ctgcgtagagtaacgtatttggtagtggatgaagctgatcgaatgtttgacatgggtttt
gaacctcaaatcactcgaattgttcaaaatattcggccagatcgtcaaactgtattgttt
tctgccaccttccctcgccaggttgaagtcttggcacgcaaagtcttgaacaaacctgtg
gaaatacaagttggtggtaggagtgttgtgaataaggacatagcacaattggttgaagtg
aggctggaaaatgaaaggttcttgagattgttagagttacttggggagtggtatgagaaa
ggaaaaattttgatatttgtcgagtcacagaataaatgtgatgctttatttagggatctg
cttaggcatggatatccttgtctctcacttcacgggggcaaagatcaaacagatcgtgag
tccaccataactgattttaaaagcaatgtttgtaatttgttgattgcaactagtgttgct
gcgagagggttagatgtcaaggagcttgaactggtgatcaactttgatagtccaaatcac
tatgaagactatgttcaccgtgttggccgtactgggcgagctggtcggaaaggctgtgct
ataacgtttgtctctgaggaagatgctagatatgctccagatcttgtcaaagcattggaa
ctctctgagcaagttgttccagatgacctgaaatctcttgcggatagtttcactgcaaaa
gtaaatcagggactcgagcaagcccatggaactggttacggaggaagtggttttaaattt
aatgaagaggaagatgaagtgaggagagcagcaaagaaagcacaagccaaagaatatggt
tttgaggatgacaagtcagattcagaagatgaagatgaaggtatccgaaaggcagggggt
gacatttcacagcaggctgcccttgctcagatagcagccattgctgccgcctctaaaggc
agtacagcttcaattcagacccctgtgcctgctgcccaactgcttcccaacagtggactg
cctgtttctcttccaggtgtccttggtctaacattaccaggaacagcagcagctgtggct
gggactggtttgcctgttgttggcaatgatggggcagctcgggctgcagcaattgcagct
gcgatgaacttgcagcataatctggcaaagatccaagctgatgcaatgcctgaacactat
gaagcagagttggagataaatgattttccacagaatgctcgatggaaggttacccacaag
gaaactttgggacctatatcagagtggactggagctgccattactacgaggggtcagtat
ttcccaccagggaaggttgcaggaccaggagatcgcaaactctacttgtttattgagggc
cctactgaacagtctgtcaagagagccaaagcagaattaaaacgtgttttggaagatatc
tcaaatcaggcattatcacttcctggtggagcacagcaaggcagatatcaagttctataa
DBGET
integrated database retrieval system
