Prunus persica (peach): 18780698
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Entry
18780698 CDS
T03092
Name
(RefSeq) RNA polymerase II transcription factor B subunit 2 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
pper
Prunus persica (peach)
Pathway
pper03022
Basal transcription factors
pper03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
18780698
09124 Replication and repair
03420 Nucleotide excision repair
18780698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pper03021
]
18780698
03400 DNA repair and recombination proteins [BR:
pper03400
]
18780698
Transcription machinery [BR:
pper03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
18780698
DNA repair and recombination proteins [BR:
pper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
18780698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
MetRS-N
Motif
Other DBs
NCBI-GeneID:
18780698
NCBI-ProteinID:
XP_007213816
UniProt:
M5X7G4
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All DBs
Position
G4:complement(2148004..2153696)
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AA seq
455 aa
AA seq
DB search
MPQVRIIAKNFMDMVAALPAMKLDKLYENAFICEAILRSLPPLAKKYVLQMLCIEVPVTA
KSMEEWVLPDGVSKHRVAIDRLIQLRIFTETVDRKRETTYTLNPIFQTNLKKLLLYGVVL
PREPMPSNVTVRLPSSEDLEAFALGQWECFLLQLINSSQIERPSNISSSMMKIFQRGLLS
QRDKEAPRLTESGFQFLLMDTNAQLWYIIREYISNSEERGVDSADLISFLLELSFHVTGE
AYNINTLTEVQKNTIKDLADLGLVKLQQGRKDSWFIPTRLATNLSVSLTDSSSRKQGFVV
VETNFRLYAYSTSKLHCEILRLFSRVEYQLPNLIVGAITKESLYSAFENGITADQIISFL
QQNAHPRVAERVPSVPENVTDQIRLWETDLNRVEMTPAYHYDGFPSRDLFEGASDFARGY
NALLWEDPEDSKKMSLVVKAENHVHMREYLSRQRQ
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaggtgaggatcatagcgaagaatttcatggacatggtggctgccttgcccgcc
atgaagctcgacaagctctacgagaacgcattcatctgcgaagccattctcaggtctctg
ccaccgctagccaagaaatatgtcttacaaatgctatgcatcgaagttccagtgactgcc
aagtcaatggaggagtgggtgctgccggatggggtctccaaacatagagttgctattgat
cggctaattcagttgagaattttcactgaaactgttgacaggaagagagaaacaacttac
acattaaatcctatatttcagaccaatctcaagaagcttttgctttatggtgtagttttg
ccaagagaaccgatgccttcgaatgttacagtgaggctcccaagctcagaggatcttgag
gcttttgccctaggacaatgggagtgtttcttgctgcaacttatcaactcatctcaaata
gaaaggccgtcaaacatcagttcatccatgatgaaaattttccagcgtggtcttttgagt
caaagagataaagaagctccaagattaactgaaagtggtttccagttcttgctgatggat
acaaatgcgcaactttggtacatcatcagagaatacatctctaactcggaggagcgtggg
gtagattctgcagatttgatttcattcctgctggagcttagttttcatgttacaggcgag
gcatataacataaatacattgactgaggttcagaagaatacaatcaaggatcttgcagat
ttaggattggtcaaacttcagcagggtcgtaaagacagttggtttatacctactagatta
gctactaatctttcagtgagcttgacagactcatcatcgaggaaacagggatttgtagtt
gtggaaacaaacttcaggctgtatgcctactcaacatctaaattacattgtgaaatttta
cgtcttttctcaagggtagaatatcaacttccaaaccttatagttggagcaataacaaaa
gaaagtttgtatagtgcttttgaaaatggcatcactgcagatcagataatttcttttctt
cagcagaatgcacatccacgtgttgcagagagagtaccatctgtacctgagaatgtcaca
gatcagattaggctgtgggaaacagatctgaatagggttgagatgactccagcgtatcat
tatgatggatttccatccagggatctctttgagggtgcttctgactttgcacgaggctat
aatgctctgctatgggaggatccagaggattcaaagaagatgtctttagtggtcaaggca
gaaaaccacgtgcacatgcgagaatatcttagccgtcaaaggcagtag
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