Prunus persica (peach): 18783960
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Entry
18783960 CDS
T03092
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
pper
Prunus persica (peach)
Pathway
pper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
18783960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18783960
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
18783960
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
18783960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
RNase_H_2
Motif
Other DBs
NCBI-GeneID:
18783960
NCBI-ProteinID:
XP_007217361
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All DBs
Position
G3:8300126..8301061
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AA seq
306 aa
AA seq
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MTLVKDNIRHKFKNNAEHRRAKFKKPNPELKMNKRVEIRSVWQQNLESEFALIEAAIAHY
PFVSFDTEFPGTILECKAWDPPAYQYQIMKGNVDAMNIIQLGLTLSDHRGNLPDLGTDCC
YIWEFNFRDFDIERGDHHSADAIEFLKRHEIDFLQNKKKGIYSSNFSWLMERMVLHNRSR
LTWVTFHGSYDFGYLMKILTQKDLPMDIGGFMGEVEKKFGKRVYDIKHLIKCQGLYGGLE
KVARLLQVGRVAGKSHQAGSDSLLTLQTFMRLKDVHFGSFLKNKDNCSLSLNQFRGVLHG
LELEAH
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgactttggtcaaagataacattcgacacaaattcaagaacaacgcggagcacaggaga
gcaaaatttaagaagcctaacccagaattaaagatgaataaaagagtggagattcgaagc
gtttggcaacaaaatttagaatccgagtttgctctcattgaggccgcaattgcccactac
ccttttgtctccttcgacactgaattcccaggcaccatacttgaatgcaaggcttgggat
ccccctgcataccaataccaaatcatgaagggcaatgtggacgccatgaacatcattcag
ctgggcctaacactctcagaccacagagggaacttgcctgatttgggcacagattgctgc
tacatatgggaattcaacttcagggacttcgacattgagcgtggcgaccatcacagcgca
gacgcaatcgagtttcttaagcggcatgaaatcgatttcttgcagaacaagaaaaagggt
atttactcttccaacttctcgtggctgatggaaaggatggtactccacaataggtcccgt
ttaacatgggtgactttccatggttcgtatgatttcgggtacctgatgaagattctaact
cagaaggacttgccgatggacattggtggtttcatgggggaggtggagaaaaagtttggg
aaaagagtttacgacatcaagcacttgatcaagtgtcaagggctttatggaggtttagag
aaagtggctcgtttgcttcaggttggtcgtgtggctgggaagagtcaccaggctggttct
gatagtctattgactttgcagacgtttatgaggctcaaggatgtgcatttcggaagtttt
ttaaagaataaagacaactgtagcctaagtttaaatcagtttcgaggggttttgcatggt
ttagaacttgaggctcattga
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