Prunus persica (peach): 18791439
Help
Entry
18791439 CDS
T03092
Name
(RefSeq) regulator of nonsense transcripts UPF3 isoform X2
KO
K14328
regulator of nonsense transcripts 3
Organism
pper
Prunus persica (peach)
Pathway
pper03013
Nucleocytoplasmic transport
pper03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
18791439
03015 mRNA surveillance pathway
18791439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pper03019
]
18791439
Messenger RNA biogenesis [BR:
pper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
18791439
mRNA cycle factors
P-body specific factors
18791439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_2
Motif
Other DBs
NCBI-GeneID:
18791439
NCBI-ProteinID:
XP_007221815
UniProt:
M5XAP2
LinkDB
All DBs
Position
G1:complement(47235222..47243360)
Genome browser
AA seq
482 aa
AA seq
DB search
MLKDQLDRTKVVLRHLPPSISQTSLVEQIDVFFSGRYNWVAFRPGKRSQKNPSYSRAYID
LKRPEDVIEFAEFFDGHLFVNEKGSQFKVIVEYAPSQRVPKQWSKKDGREGTIFRDPEYL
EFLEFLAKPAENLPSAEIQLERREAERSGAGKDAPIVTPLMDFVRQKRASKAGSRRSLTN
GKTSRRAGGPSSRSPSLATSKRGSERKRNSATMYVLRDARKNTSAKDKSTYILVPKRDDQ
QPSEKSVTLASAAGTHVLEEESGVSGADAVKKKILLLKGKEREITHVPANMSQQQSSSAK
NMGGTIALKQNLRRQENGRIIRGILLNKDARQSQSSGIYSAQQIQTSNSDRDKRPPRSQH
VQLILKDTNGAPDYNIVGNDLHGICSEKQEKRIRNKERPDRVVWTPLNRLDGSSASDESL
SSAFQPAHSLLDSSEGCHKHHGRRGTTHGVKDLDGSPVAGEGKHSKRGYGSHECDVWLLE
PS
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaggaccagttggatcgaaccaaggtggtgctacggcacttgccgccttcgatt
tcgcaaacttcacttgtggaacaaatcgacgttttcttttctggccgctacaactgggtc
gctttccgtcccgggaagagaagccaaaagaatccgtcatattctagagcctacattgat
ttgaagaggccagaggatgttattgagtttgctgaattctttgatggtcatctgtttgtt
aatgagaagggcagtcaatttaaagttattgttgagtatgctccttcacaacgcgttcca
aaacagtggtctaagaaggatggtcgtgaaggaaccatattcagagatcccgagtatctg
gagtttcttgaatttcttgcaaagcctgctgagaatcttcctagtgcggagatacaattg
gagagaagagaagcagagcgttctggtgccggaaaggatgctcccatagttacaccatta
atggactttgttcgtcagaaaagggcttccaaggctggatctcggaggtcgctgactaat
ggtaaaacgagcagaagagctggtggaccatcatctagaagtccaagtttagccacgagc
aaacgaggttctgagaggaaaagaaattctgccacaatgtatgttttgagggatgccaga
aagaacaccagtgccaaagacaagtcaacttacattctggtacccaagcgcgatgatcag
caaccttctgaaaagtctgtcactttggcatctgcagctggaactcacgttttggaagag
gagagtggagtttctggtgctgatgctgtgaaaaagaaaatcctgcttctgaaagggaaa
gagagggagataactcatgttccggcgaacatgtcacagcagcagagttcatctgctaaa
aacatgggtggtacaattgcgctgaaacaaaacctgcgccgtcaagaaaatgggaggatt
ataagaggaatacttctaaacaaggatgcacgtcaaagtcagtcttctgggatttactct
gcgcaacaaatccagacttcgaattcagatagggacaaacgacctcctcggtcccaacac
gtgcaattgattttaaaggatacaaatggcgctccagattataatattgttgggaatgac
ttgcatggtatttgtagcgagaagcaggagaaacggataaggaataaggagagacctgat
cgtgttgtatggactcctctaaatcgtttagatggatcatctgcaagtgatgagtctttg
tcatctgcatttcaacctgctcactcactgctagattcttcagaaggctgccataaacat
catggtcgccgaggaacaacacatggtgttaaggatcttgatggctcaccggttgcaggt
gaaggaaaacattcaaaaagaggctatggctcccatgagtgtgatgtttggctacttgaa
ccttcgtag
DBGET
integrated database retrieval system
