Halopseudomonas phragmitis: BVH74_05680
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Entry
BVH74_05680 CDS
T07765
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
ppha
Halopseudomonas phragmitis
Brite
KEGG Orthology (KO) [BR:
ppha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppha03021
]
BVH74_05680
Transcription machinery [BR:
ppha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BVH74_05680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
UCR_14kD
GntR
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
AQZ94272
UniProt:
A0A1V0B2V5
LinkDB
All DBs
Position
1229804..1230667
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AA seq
287 aa
AA seq
DB search
MSTALQPVHNLVPGANLEAYVQTVSSIPVLSAEEERELADRLFYHEDLDAARQLVMSHLR
FVVHIARSYSGYGLAQADLVQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIRAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSAKKKLAWLNHDEVNAVAEDLGVAAHEVREMESRLYGQD
LGFDAGADDDDDATYAPVHYLEDKRYDPATLLESADWSDNSVGHLQQGLASLDERSRDIL
YQRWLAEEKATLHELAAKYQVSAERIRQLEKNAMNKLKKNLEAEVAA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgctttgcagcccgtacataacctggttcccggcgcgaacctggaggcttat
gtccagaccgtgagcagcatcccggtactcagtgccgaggaagagcgcgagcttgcggat
cgtttgttctaccacgaggatctggacgccgcgcgccaactggtcatgtcgcacctgcgt
ttcgttgtgcacattgcccgcagctattccggctatggtctggcccaggccgatctggtt
caggaaggcaatgtcggcctgatgaaggcggtcaagcgcttcaacccggaaatgggcgta
cgtctggtgtccttcgccgtgcactggattcgcgccgagattcacgagttcatcctgcgc
aactggcgcatcgtcaaggttgccaccaccaaggcccagcgcaaactgttcttcaacctg
cgcagcgccaagaaaaagctggcctggctcaaccacgatgaagtcaacgccgtagccgaa
gacctcggcgtggccgcccacgaagtgcgcgagatggaaagccgtctgtacggccaggat
ctgggctttgacgctggcgccgacgatgacgacgacgccacctacgcgccggttcactat
ctggaagacaagcgctacgacccggccaccctgctggagtcagccgactggtcggacaac
tcggtcggccatctgcagcaaggcctggccagtctcgacgagcgcagccgcgacattctc
tatcagcgctggctggccgaagaaaaggccaccctgcatgagctggcagccaagtaccag
gtctcggcggaacgcatccgccaactggaaaagaacgccatgaacaagctgaagaaaaat
ctggaggccgaggtcgcggcctga
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