Pseudomonas phenolilytica: HU825_11410
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Entry
HU825_11410 CDS
T08532
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pphn
Pseudomonas phenolilytica
Pathway
pphn01501
beta-Lactam resistance
pphn01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pphn00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HU825_11410
01503 Cationic antimicrobial peptide (CAMP) resistance
HU825_11410
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pphn02000
]
HU825_11410
01504 Antimicrobial resistance genes [BR:
pphn01504
]
HU825_11410
Transporters [BR:
pphn02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HU825_11410
Antimicrobial resistance genes [BR:
pphn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HU825_11410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
SecD-TM1
DUF4232
Motif
Other DBs
NCBI-ProteinID:
UIP87134
LinkDB
All DBs
Position
2359552..2362710
Genome browser
AA seq
1052 aa
AA seq
DB search
MSRFFIDRPIFAWVLAIVAMLAGALSLVKMPISQYPNIAAPAVAIQVSYPGASAQTVQDT
VVQVIEQQLSGLDGFRYMSAESNSDGSMTIIVTFEQGTNPDIAQVQVQNKLQLATPRLPE
EVQRQGLRVVKYQKNFFLIIGLADTTGKMSNFDLGNLIASQLQDPISRIDGVGDYLLFGS
PYAMRIWLDPAKLNSYQLTPGDVANAIREQNVQVSSGQLGGLPTLSGVQLNATVLGKTRM
TTPEEFEEILVKVKADGSQVRVKDIARVELGADNFSISSKRNGEPSAGLALRLASGGNLL
ETVAAVKAAMEKQKAYLPEGVEVVYPYDTTPVVEASISSVVHTIIEAVVLVFLVMYLFLQ
NFRATLIPTLAVPVVLLGAFALLPYFGLSINVLTMYAMVLAIGLLVDDAIVVVENVERLM
HEEGLSPLEATRKSMGQIQGALVGIGLVLSAVFVPMAFFGGSAGIIYKQFAVTIVLCMGL
SVLVALIFTPALCATILKKPKGDAHHEKKGFFGWFNRTFERGTARFERGVGGMLKHRGRY
LLAFVLITAGTGYLFTQIPKAFLPNEDQGLMMVEVRMPVNSSAERTGAVLQQVQDYLKEE
EGELIQHVLTVNGFNFAGRGQNSGLGLVMLKGWDQRAAEGQDVFSIAERANAHFATIKDA
TVMAFVPPAILEMGNAMGFNLYLQDNAGVGHAALMEARNQFLQLAGEHPKLRAVRPNGKD
DEPQFQVNIDDEKARALQVSIASINQTMSAAWGSMYVNDFIDRGRVKRVYIQGEETARIT
PEDFDKWYVRNALGEMVPFSAFATGEWTFGSPKLERYGGISSVEILGEPAPGYSTGDAMV
AIAEIMQQLPPGIGLSYTGLSYEEIQTGDQAPMLYALTVLIVFLCLAALYESWSVPAAVM
LVVPLGILGSVLATLFRDLTADVYFQIGLMTTVGLSAKNAILIVEFAKDLYEKEGMPLVQ
AAVHAARLRLRPIVMTSLAFTFGVLPMALASGAGAGSQHSVATGVVGGMITATVLAVFFV
PLFYVVVVKLFEGRKKPHAVAEAEAEAEGETA
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgttttttcattgaccggccgatcttcgcctgggtgctggcgatcgtcgccatg
ctcgccggcgcgttgtcgctggtgaaaatgccgatcagccagtacccgaacatcgccgcc
ccggcggtggccatccaggtcagctaccccggcgcctccgcgcagaccgtgcaggacacc
gtggtgcaggtcatcgagcagcagctcagcggcctcgacggcttccgctacatgtccgcg
gagagcaattccgacggcagcatgaccatcatcgtgaccttcgagcagggcaccaacccg
gacatcgcccaggtgcaggtgcagaacaaactgcagctggccaccccgcgtctgcctgaa
gaagtgcagcgccagggcctgcgcgtggtgaagtaccagaagaacttcttcctgatcatc
ggtctggccgataccaccggcaagatgagcaacttcgacctcggcaacctgatcgcctcg
cagctgcaggacccgatttcgcgcatcgacggtgtcggcgactacctgctgttcggctcg
ccttacgccatgcgcatctggctcgatccggccaagctcaacagctaccagctgacgcct
ggcgacgtcgccaatgccatccgcgaacagaacgtgcaggtgtcctccgggcagctcggc
ggtctgccgacgctcagcggcgtgcagctcaacgccacggtgctgggcaagacgcgcatg
accacgcccgaggagttcgaggaaatcctggtcaaggtcaaggccgacggctcacaggtg
cgcgtcaaggacatcgcccgcgtcgagctgggtgccgacaacttctccatttccagcaag
cgcaacggcgaaccctcggcgggcctggcgctgcgcctggcttccggcggcaacctgctg
gagaccgtggccgcggtgaaggccgcgatggaaaaacagaaagcctacctgcccgaaggc
gtcgaggtggtctatccctacgacaccacgccggtggtggaggcctcgatcagttcggtg
gtgcacaccatcatcgaggcggtggtgctggtcttcctggtgatgtacctgttcctgcag
aacttccgcgccacgctgattccgaccctcgcggtgccggtcgtgctgctcggcgccttc
gcgctgctgccgtacttcggcctgagcatcaacgtgctgaccatgtacgcgatggtgctg
gccatcggtctgctggtggacgatgccatcgtggtggtggagaacgtcgagcgcctgatg
cacgaggagggcctgtcgccgctggaagccacgcgcaagtcgatggggcagatccagggt
gcgctggtcggcatcggcctggtgctgtcggcggtgttcgtgccgatggccttcttcggc
ggttcggcggggatcatctacaagcagttcgccgtgaccattgtgctttgcatgggcctg
tcggtgctggtcgcgctgatcttcaccccggcgctgtgcgccaccatcctgaagaagccc
aaaggcgacgcccaccacgagaagaagggcttcttcggctggttcaaccgcaccttcgag
cgcggcaccgcccgtttcgagcgcggcgtcggcggcatgctcaagcaccgcgggcgctac
ctgctggccttcgtgctgatcactgccggcaccggctacctgttcacccagattcccaag
gccttcctgcccaacgaggaccagggcctgatgatggtggaagtgcgcatgccggttaac
tcctccgcagagcgcaccggtgcggtacttcagcaggtgcaggactatctgaaggaagag
gaaggcgagctgatccagcacgtgctgaccgtcaacggcttcaacttcgccggtcgtggg
cagaactccggcctcggtctggtcatgctcaagggctgggaccagcgcgccgcggagggt
caggacgtgttcagcatcgccgagcgcgccaacgcccatttcgcgacgatcaaggacgcc
accgtgatggccttcgtgccaccggcgatcctggaaatgggtaacgcgatgggtttcaac
ctctatctgcaggacaacgctggcgtcggtcatgcggcattgatggaggcgcgcaaccag
ttcctgcaactggccggcgagcatccgaagctgcgcgcggtgcgccccaacggcaaggac
gacgagccgcagttccaggtcaacatcgacgatgagaaggcccgtgcgctgcaggtcagc
atcgcgtcgatcaaccagaccatgtcggcggcctggggctcgatgtacgtcaacgacttc
atcgaccgcggccgggtcaagcgcgtgtatatccagggtgaggagaccgcgcgcatcacg
ccggaggatttcgacaagtggtacgtgcgcaacgccctcggtgagatggtgccgttctcg
gccttcgccaccggcgaatggaccttcggctcgcccaagctggagcgctacggcggcatc
tcctcggtggaaatcctcggcgaaccggcaccgggctacagcaccggcgacgccatggtg
gccatcgctgaaatcatgcagcaactgccgccggggatcggcctgagctacaccgggctt
tcctacgaggaaatccagaccggtgaccaggcgccgatgctctacgcgctgaccgtgctg
atcgtgttcctctgcctggcggcgctctacgagagctggtcggtgccggcggcggtgatg
ctggtggtgccgctgggcatcctcggctcggtgctcgccacgctgttccgggatctcacc
gccgacgtctatttccagatcggcctgatgaccacggtcggcctgtcggcgaagaacgcc
atcctcatcgtcgagttcgccaaggacctttatgagaaggaaggcatgccgctggtccag
gcggcggtgcacgcggcgcgtctgcgcctgcgccccatcgtcatgacctcgctggcgttc
accttcggcgtgctgccaatggccctggccagtggcgccggcgccggcagccagcattcg
gtggcgaccggggtggtcggcgggatgattaccgccaccgtgcttgcggtgttcttcgtg
ccgctgttctacgtggtggtggtcaagctcttcgagggccgcaagaagccgcacgccgtt
gccgaagccgaagccgaagccgaaggagaaaccgcatga
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