Pantoea phytobeneficialis: CTZ24_26645
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Entry
CTZ24_26645 CDS
T09899
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
KO
K18138
multidrug efflux pump
Organism
ppho
Pantoea phytobeneficialis
Pathway
ppho01501
beta-Lactam resistance
ppho01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ppho00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CTZ24_26645
01503 Cationic antimicrobial peptide (CAMP) resistance
CTZ24_26645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppho02000
]
CTZ24_26645
01504 Antimicrobial resistance genes [BR:
ppho01504
]
CTZ24_26645
Transporters [BR:
ppho02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CTZ24_26645
Antimicrobial resistance genes [BR:
ppho01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CTZ24_26645
BRITE hierarchy
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
QGR10038
LinkDB
All DBs
Position
pMSR2D:complement(231270..234431)
Genome browser
AA seq
1053 aa
AA seq
DB search
MSRFFIDRPIFAWVLAIIIMLAGGISILKLPVEQYPDVAPTSVQIRATYPGADATTLQNT
VTQVIEQNMSGLDGLMYMSSTSDSSGTLQLTLSFENGTDPDIAQVQVQNKLQLATPLLPQ
EVQQQGITVRKSSSVFFLVPGFVDETGRMSMEDIADYVAANLKDPISRINGVGDTTLFGS
QYAMRIWLDPNKLNNYQLTPVDVMSMIETQNAQIAAGQLGGAPPVKGQQLNASIIAQTRL
TSPEEFGNILLKVNSDGSQVRLHDVARIERGGENYNFVVKINGKPASALGIQLAAGANAL
DTANAIRAKINELKPYFPQGLKVVYPYDTTPFISISIHEVVKTLFEAIVLVFLVMYLFLQ
SFRATLIPTIAVPVVLLGTFGILAAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM
AEEGLKPKAATRKSMGQIQGALVGIALVLSAVFVPMAFFGGSTGVIYRQFSITIVSAMAL
SVLVALILTPALCVTILKPVKPGSHGQHRGLFGWFNRKFEQSAHHYTGSVARMLNKSGRY
LVIYGVLVVGMAVLFMRLPTSFLPSEDQGVLATQAILPAGATQERTQAVLDQVNDYYLNN
EKSNVENVLTVNGFGFAGRGQNVGIAFIGLKDWSQRPGEENKVDGIVSRAAKAFSKIMDA
NVVAFNLPPIIALGNATGFDFELIDQGSLGHDKLVAARNQLLDLARQHPDTLVAVRPNGM
EDSPQYKVNIDQEKATALGVDLSDINTTLSSAWGGSYVNDFIDHGRVKKVYVMSDAPYRM
MPKDMDNWYVRASNGKMVPFASFSTAEWVYGSPRLERYNGLSSLEILGQPAPGKSSGEAM
ALMEQLAKQLPPGVGFDWTGMSYQERMTGEQAPALYALSLIVVFLCLAALYESWSIPFSV
MLVVPLGVFGALVATMLRGLNNDVYFVVGLLTTIGLSAKNAILIVEFAKDQIEKEGKGVV
EATLEAARMRLRPILMTSLAFILGVLPLALSSGAGSGAQNAVGTGVIGGMVAATLLAIYF
VPVFFVVVRNRFGGKPRDDEDDEDEEDEEDILV
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgtccagattctttattgaccgcccgatctttgcctgggtgctggcaattatcatcatg
ctggccgggggaatttcgatcctgaaactgccagtggagcaatacccggacgttgcgccc
acctcagtgcaaatccgtgccacctatccaggtgcggatgccaccacgttgcagaacacc
gtgacccaggtgattgagcagaacatgagcgggctggatggcctgatgtatatgtcctcc
accagcgattcatccggcacgcttcagctgacgctgtcgtttgagaacggcactgacccg
gatatcgctcaggtgcaggtgcagaacaagttgcagctcgccacccccctgctgccgcag
gaagtgcagcagcagggcatcaccgtgcgcaaatcctccagcgtgttcttcctggtgccc
ggtttcgtcgatgaaaccggccgcatgagcatggaagatattgccgattacgtggcggct
aacctgaaagatcccatcagccgtatcaacggcgtgggggataccacgctgtttggttcg
cagtacgcgatgcgtatctggctcgatcccaacaagctgaacaactaccagctgacgccg
gtggatgtgatgagcatgattgaaacccagaatgcgcagattgccgccggtcaacttggt
ggcgcgccgccggtaaaaggtcagcagcttaacgcctcgatcattgcccagacccgactc
acctcgccggaagagtttggcaacatcctgctgaaagtgaacagcgacggctcgcaggtg
cgtctgcatgatgtggcgcggatcgagcgcggcggtgagaactataactttgtggttaaa
atcaatggcaaaccggcgtcagcattgggtattcagctggcggcaggcgctaacgcgctg
gataccgccaatgctatccgcgcgaaaattaatgaattgaaaccttacttcccgcaggga
ctgaaggtggtctatccctacgacaccacgccgtttatcagtatctcgatccacgaggta
gtgaaaacgctgtttgaagccatcgtgctggtgttcctggtgatgtacctgtttttgcag
agtttccgcgccacgctgatcccgaccattgccgtaccggtggtgctgctgggtaccttt
ggcatcctcgctgccttcggttactcgattaacaccctgaccatgttcggcatggtgctg
gcgatcggtttgctggtggatgacgccatcgtggtggtggagaacgtcgagcgcgtgatg
gctgaggagggcctgaaaccgaaggccgccacgcgtaaatcgatggggcaaattcagggg
gcgctggtcggcattgcgctggtgttgtcggcggtgtttgtaccgatggcgttctttggc
ggcagtaccggggtaatctatcgccagttctccatcaccattgtttccgcgatggcgctc
tcggtgctggtggcgttgatcctcactccagcgctgtgtgtcaccatcctgaagccggtt
aaacccggtagccacgggcaacatcgcgggctgttcggctggtttaaccgcaagtttgag
caaagtgcacatcattacaccggttctgtggcgcgtatgctgaacaagagcgggcgctat
ctggtgatttacggtgtactggtcgtcgggatggcggtgctgtttatgcgcctgcccacc
tcgttcctgccgtcggaagatcagggggtgctcgccacccaggccatcctgccggccggt
gctacccaggaacgtacccaggcagtgctggatcaggtcaatgattactacctgaacaac
gagaaaagcaacgttgagaacgtgctgacggtcaacggcttcggctttgccggacggggc
cagaacgtggggatcgcctttatcggcctgaaggactggtcacagcgtccgggtgaagag
aacaaagttgacggtattgtcagccgtgccgctaaagcgttcagcaaaatcatggatgcc
aatgtggtggcctttaacctgccgccgatcattgcgctgggtaacgcgaccggttttgac
tttgagttgattgaccagggcagtttggggcatgacaaactggtggccgcacgtaaccag
ctgctggatctggcacgccagcatcccgatacgctggtggcggtgcgtccgaacggcatg
gaagacagcccgcagtacaaagtcaacattgaccaggagaaagccaccgcactgggcgtc
gatctgtccgacatcaataccaccctgagcagcgcctggggcggcagttatgttaacgac
ttcattgaccacggcagggtgaaaaaggtctacgtgatgagcgacgcgccgtatcgcatg
atgccaaaagatatggataactggtacgtgcgcgccagcaacggcaagatggtgccgttt
gccagcttctcgacagccgagtgggtttacggctcaccgcgtctggaacgttataacggc
ctgtcttccctggaaattctcggtcagccggcaccgggtaaaagttcgggcgaagcgatg
gcgctgatggaacaactggcgaaacaactgccacctggcgtcggctttgactggaccggc
atgtcgtaccaggaacgcatgaccggcgaacaggcaccggcgctgtacgccctgtcattg
attgtggtgttcctgtgcctggcggcgctgtacgagagctggtcgattccgttctcggtg
atgctggtggtgccgcttggcgtgtttggtgcgctggtcgctaccatgctgcgtgggctg
aataacgatgtttacttcgtggttggcctgttaaccaccatcggtctgtcggcgaagaac
gccatcctgatcgtagaattcgccaaagaccagatcgagaaagaaggtaaaggcgtggtg
gaagccacgctggaagcggcccgtatgcgcctgcgtccgattctgatgacatcgctggcg
tttattctcggtgtactgccgctggcactgagttctggtgccggttccggtgcacagaat
gccgtcggcaccggggtaatcggcgggatggtggcggcaaccctgctggctatctatttt
gtcccggtgttctttgtggtggtgcgtaaccgctttggcggcaagccccgcgacgatgag
gacgatgaggacgaagaggacgaagaggacatcctcgtgtaa
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