Candidatus Pelagisphaera phototrophica: GA004_00540
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Entry
GA004_00540 CDS
T09061
Name
(GenBank) ABC-F family ATP-binding cassette domain-containing protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
ppht
Candidatus Pelagisphaera phototrophica
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ppht03012
]
GA004_00540
Translation factors [BR:
ppht03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
GA004_00540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_16
ABC_tran_CTD
AAA_22
AAA_28
RuvB_N
AAA_18
ATP-synt_ab
NB-ARC
AAA_33
MeaB
AAA_30
Zeta_toxin
AAA_13
TsaE
RsgA_GTPase
AAA_15
KAP_NTPase
Mg_chelatase
AAA_23
DO-GTPase2
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
QXD32251
LinkDB
All DBs
Position
108693..110651
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AA seq
652 aa
AA seq
DB search
MIQLRNLKLQYGERFIFRDATASIGNKDRIGLVGSNGAGKTTLLKILADQEELDGGFVDK
ANYVTIGYLPQDGIIAADRFLYEEAESAFENILTLTSKIDEANTLLHSLNTDSKDYHEIL
ELIGTWERELENHDVEKLPYRIESVLHGLGFEQSDMKKQTSEFSGGWQMRIAIAKLLLAS
PSLLLLDEPTNHLDIISQRWFENYLKRYEGAILMVSHDRAFLDELCKQTFELTQGNLNVY
QGGYSYFEEQSKIRKDQLIRSFKNQQKEIERTEKFIDRFRYKASKASQVQSRIKALDKVE
RIEIETEENSIAFSFPPAPRSGQTIMELENLCKSYGDLKVIQNATIRIERGDRLAVVGAN
GAGKSTLAKVIAAVEPFQSGIRTLGHNTIISYFAQHQADELEPSYTVLETLERTNSGQNT
TQLRSALGAFLFHGDDVFKKTSVLSGGERNRLALAKILTQQANFLILDEPTNHLDMRSQE
ALQRALENYEGAFIIVSHNRAFVDRIVNKTLEVRKDGLSLFPGNVSDYLRHLEKLDNDSQ
PKANIASSQSSKSVSKISPKERRQKRAVLVTVLSPLKKRGSELEELISQLETSQELLESK
MADPAFFKTGDAREAMAAHERDRIALEKNYEEWSRLSDRIAAKEQELDEFSG
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgattcagctccgcaacctgaagctccagtacggtgagcgcttcatctttcgagatgct
accgcctctattggcaacaaggatcgaatcggactcgtcggctccaatggagcaggaaaa
accacgttattgaaaattctcgccgatcaagaggaactcgacggtggatttgtcgacaag
gcaaactacgttaccattggctacctgccccaagacgggataattgcagcagataggttc
ttatacgaggaagccgaatcagccttcgagaatatcttaacgctaacctctaagatcgac
gaagccaacacactactacattccttaaatacagactccaaggattaccacgaaatactc
gagctcattgggacatgggagcgggaattggaaaaccacgatgtggaaaaactcccctac
cgtattgaatccgttttgcacggtctcggattcgaacagtccgatatgaaaaagcagacc
agcgaattcagcggcggctggcaaatgcgaatcgctatcgcgaagctcctccttgcctcc
ccttccctgcttcttctggatgaaccgaccaatcacctggacatcatttcccagcgctgg
tttgaaaactacctcaaacgttacgaaggggctattcttatggtctcccatgaccgtgcc
tttttagacgagctttgtaagcagacctttgaacttacccaaggaaatctgaatgtctac
caaggtggttactcctattttgaggaacagagcaaaatcaggaaagaccagttgattcgc
tcgttcaagaatcagcaaaaggagatcgagcgaaccgagaaattcatagaccgatttcgc
tacaaagcatccaaagccagccaagtccaaagccgtatcaaggctctggataaggtcgag
cgaattgagatcgagactgaagagaactcgattgccttttcctttcccccagctccccga
agtgggcaaacgatcatggaactcgaaaatctatgcaagtcctacggcgacttgaaagtg
atccagaatgcgaccattcgaattgaaaggggcgatcggcttgcagtggttggagcaaat
ggagccgggaagtctaccttggcaaaggtcattgccgcggtcgaaccatttcaaagtggt
atccgtacgctagggcacaatacgataatttcctacttcgctcagcaccaagccgacgaa
ctggaacccagctataccgtcctcgaaacactcgaaagaacaaattccggccaaaacacc
actcagctacgttccgccctcggggcctttctctttcatggtgacgacgtattcaaaaaa
acaagcgtactttcgggcggtgaacgaaatcgtctcgccctagcaaagattcttacccaa
caagccaatttcctaatcctcgacgaaccaacaaatcacctcgatatgcgttcgcaagag
gcattgcagagagcgctcgagaattacgaaggagcctttattattgtatcgcacaaccgc
gcttttgtggatcgcatcgtaaacaaaacgctcgaagttcgtaaggatggcctttctctg
tttcctggtaacgtatccgattacctaagacatctagaaaaattggataatgacagccag
ccaaaagccaacatcgccagttcccaatcatcgaaaagcgtttcgaaaatttccccgaaa
gaaaggcgccagaaaagggcggtattggttactgtattgagtccattaaaaaagaggggt
tcagagctcgaggagctaatctcccagctcgaaactagccaggagttgctggaatccaag
atggccgatcctgcttttttcaagacgggcgacgccagagaggctatggctgctcacgag
cgggatcgaattgctctggagaagaactatgaagagtggagtagactctcagatcggatc
gcggccaaagagcaagaacttgacgaattctctggataa
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