Pseudomonas putida ND6: YSA_08305
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Entry
YSA_08305 CDS
T02170
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi03030
DNA replication
ppi03430
Mismatch repair
ppi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YSA_08305
03430 Mismatch repair
YSA_08305
03440 Homologous recombination
YSA_08305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppi03032
]
YSA_08305
03400 DNA repair and recombination proteins [BR:
ppi03400
]
YSA_08305
Enzymes [BR:
ppi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YSA_08305
DNA replication proteins [BR:
ppi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
YSA_08305
DNA repair and recombination proteins [BR:
ppi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
YSA_08305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
AAA_5
AAA_22
RuvB_N
AAA_14
ResIII
AAA_30
AAA_19
PIF1
AAA_16
AAA_18
AAA_2
TsaE
nSTAND3
AAA_7
HasA
SKI
zf-CXXC
AAA_24
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
AFK71259
UniProt:
I3V0I8
LinkDB
All DBs
Position
4472724..4474748
Genome browser
AA seq
674 aa
AA seq
DB search
MVGQTHVLKALINALDNQRLHHAYLFTGTRGVGKTTIARIIAKCLNCETGITSTPCGTCS
VCREIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRFKVYLIDEVHMLSTHSFN
ALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMSPERVVEHLSHVLAAENVP
FEEDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVLAADVRAMLGSLDHGQVYGVLQALL
EGDARALLEAVRNLAEQGPDWSGVLAEMLNVLHRVAIAQALPEAVDNGQGDRERVLALAS
ALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRPADTDDAPKPVLKPAGIS
QATADPAGKVAAAAPVALSSPVAAVPAEPVAQAPQLEVPAPATADHEPEAEADVELKAEA
EAISVPEPVAEVVDLPWEEPAVAPAPLAAEPAPEPAPAPEPVAPVAPPQAAPAHDEPPFD
PSAYAAVGMERDDEPPLDEDYYGGESDPAGFSYLDELAEHVQEDVSKPAAEPLPAAKPAT
GLALQWLELFPQLPVSGMTGNIAANCTLIAADGDDWLLHLDPGQGALFNATQQRRLNEAL
NQHLGRTLNLRIELILPEQETPAQAAARKRAERQQDAVASIEQDPLIQQMIKLFGAKVRQ
DTIEPVEALASQGQ
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggtcggccagacccatgtgctcaaggccttgatcaatgccttggacaaccagcgcctg
caccatgcctacctgttcaccggtacccgcggcgtgggcaagacgaccatcgcccgtatt
atcgccaagtgcctgaactgtgaaaccggcatcacctccacgccctgtggcacctgttcg
gtgtgccgggaaatcgacgaaggccgttttgtcgacctgatcgagatcgacgccgccagc
cgtaccaaggtcgaggacacccgcgaactgctcgataacgtgcagtacgcccctagccgt
gggcgcttcaaggtctacctgatcgacgaagtgcacatgctctcgacccactcgttcaac
gccttgctcaagacgctggaagagccaccgccctacgtcaagttcatcctcgccaccacc
gacccgcagaagctgccggccactatcctgtcgcgctgcctgcaattctcgttgaagaac
atgagcccggagcgggtggtggagcacctcagccacgtactggccgccgaaaatgtgccg
ttcgaggaagatgccctgtggctgctgggccgtgcggccgatggttccatgcgtgatgcc
atgagcctgaccgaccaggccatcgcctttggtgaaggcaaggtactggctgccgatgta
cgtgccatgttgggtagcctcgaccatggccaggtgtatggggtcttgcaggcactgctc
gaaggcgatgccagggctttgctggaggccgtgcgtaacctggccgagcaaggaccggac
tggtcgggcgttctggccgaaatgctcaatgtgctgcaccgtgtagccattgcccaggcg
ctgcccgaagcggtagacaacggccagggtgatcgcgagcgggtattggcgctggcttcg
gcgctgccggccgaggatgtgcagttctattatcagatgggcctgattggccgccgtgac
ctgccccttgcgccggacccgcgcggtggcttcgagatggtgctgttgcgcatgctggcg
ttccgcccggcagacacggacgacgcaccgaagccggtgctaaagccagcggggatcagc
caggccacagctgatcctgcagggaaggtggcagccgcggcgccggtcgcgctttcatcg
cctgttgcggctgtgccggcggagcctgtagcgcaagccccgcagctggaggtgcctgca
cccgcgacggctgatcatgaaccggaggccgaggcagatgttgagctgaaggccgaagcc
gaggccatctccgtacctgagcctgttgccgaagtggtcgacctgccgtgggaagagcct
gccgttgcacccgcgccgttagcggccgaacccgcgcctgaaccggcacctgcgcccgag
cctgttgccccggtggcgcccccacaggccgccccggcacacgacgagccgcctttcgac
ccgtctgcctacgctgccgtggggatggagcgcgacgatgagccgccgcttgacgaagac
tattacggcggcgaaagcgatccggcaggtttcagctacctggacgaattggccgagcat
gttcaggaagacgtgtccaaaccggctgccgaaccgttgccggcagccaaaccggccacc
ggcctggccttgcaatggctggaattattcccacagttgcctgtgtccgggatgacaggc
aacatcgcggcaaactgtacgctgattgccgccgatggcgacgactggttgctgcatctg
gacccgggccagggtgcgttgttcaacgccacccagcagcggcgcctgaacgaagcgctc
aaccagcacttggggcgcacgctgaacctgcgtatcgagctgatcctgcccgagcaggaa
accccggctcaggccgcagcgcgcaagcgtgccgagcgccagcaggacgccgtcgcgtcg
atcgagcaggatccgttgatccagcagatgatcaagttgttcggcgccaaggtgcggcag
gatactattgagcctgtagaagccctggccagtcagggccagtaa
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integrated database retrieval system
