KEGG   Phaeobacter piscinae: PhaeoP14_00423
Entry
PhaeoP14_00423    CDS       T05105                                 
Name
(GenBank) Superfamily I DNA and RNA helicase
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
ppic  Phaeobacter piscinae
Brite
KEGG Orthology (KO) [BR:ppic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppic03400]
    PhaeoP14_00423
Enzymes [BR:ppic01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PhaeoP14_00423
DNA repair and recombination proteins [BR:ppic03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PhaeoP14_00423
SSDB
Motif
Pfam: UvrD-helicase AAA_19 zf-C4_Topoisom UvrD_C UvrD_C_2 AAA_30 Viral_helicase1 Trm112p Helicase_IV_N AAA_12 Zn_Tnp_IS1595 TF_Zn_Ribbon
Other DBs
NCBI-ProteinID: ATG38553
LinkDB
Position
complement(455948..458956)
AA seq 1002 aa
MNKVAVHSRQKCVPQGSQLPNICYTLEKTDNSVHMNLVSKSFLGFLVDPLGRHPRSLTLQ
EKGIAARGAGSPWIGLEDISTCPSVKKGLLSSSLSLDLGGGRNLTLPAVDTTAAKKFADA
AATAWTDFNREELEKEDVAVRRILQALDALKVSDAYPAACHVAPLARDAADLNSRVLSKL
NADAVGKKVMSRIAPITAFASDPNAVRDASIEAFVESQLLLWKDFFDTVESMPLTPEQRL
SVVVDEDATLVLAGAGSGKTSVITAKAAYLVKAEIRKPSELLLLAFAKDAATEMSERIEA
RCGVPVAARTFHALAYEIIGEVEGEKPPLAPTATDDKAFLSLMKEILRHVVATASDIAQT
VIGWFAGFFDDFPTEWDFKTKHEWYAQIESRNLRTLQGEMVNSFEELLIANWLFRNGIAY
EYEPSYEHKLQKTGRRTYLPDFRLTESSVYIEHFGVRKKRGRDGVEELSTAPYVDRDEYL
ESMDWKRQVHAEHETVLVETYSWEREDDRLLEALAEKLEPHVTLRPIPDIEIYDRVAEVG
VVDSFTSLMGTFLRHFKNGGYRVEDCSDKAQTLKLGKRAEAFLKIFGAVFREYQSRLGDR
IDFEDMVNRATEFVESGRYQSPFRHILVDEFQDISTGRARLIQALKRQHSDAKVFAVGDD
WQSIYRFAGSDIHIMRNFGAEFGGTYSGATGVHRTVDLGRTFRSVDKIALAARRFVLRNP
AQITKTVIPAGKTDEPSIRIAWTRRDNGEKTLSDAVAALAATEGKEGRKPSILILGRYRF
LRPDIERLQRQNPGATINFKTIHASKGLEADHVIILGADNARMGFPSMIVDDPLLGLVSP
EAEPYQNAEERRVMYVAVTRARRTVTILASEARPSVFVEELMSEPEFGVVVPLDAQKHTH
TCPACGGRLLHMAGKDGRDWYRCEHVKLCGSSMSACPACGVGLPIHSQTKGELVCTDCGE
TQQACPSCEAGWLVERRGRFGAFLGCVRFPDCAGKAKLKKSA
NT seq 3009 nt   +upstreamnt  +downstreamnt
atgaacaaagtagccgtccattcgcgccagaaatgcgtcccacaaggttcccagctgccc
aatatctgctacaccttagaaaaaactgacaattcggtgcacatgaacctcgtctcaaaa
tccttcctggggttcctggttgaccctctgggccggcacccaagatccctgactttgcaa
gaaaagggtatcgcggcacgcggggctggttcgccctggatagggcttgaagatatatcg
acatgcccgtcggtgaagaagggccttctctcgtcatcgctctcgctcgatctcgggggc
ggtcgaaacctgaccttgccagcggtggatacgactgcggccaagaaattcgcagatgcg
gctgcaaccgcctggactgatttcaatcgggaggaactggaaaaggaggacgtcgcagtc
cgtcgcatccttcaagcgctcgatgcactcaaggtgtcggatgcttacccagctgcgtgc
cacgtagcgccgttggctcgcgatgctgccgacctaaacagccgcgtgttgtctaagctg
aatgcggatgccgtcggcaaaaaagtgatgtcccgaattgccccaatcacggcgtttgca
tccgatccgaatgctgtccgggacgcgtcaatcgaggcgttcgtggagtctcaactgctt
ctttggaaggatttcttcgacacagtcgagtccatgccgctgacgccggaacagcggctc
tccgtcgttgtcgacgaagacgcgactctcgttctggctggcgccggatcgggtaagacc
agcgtgatcaccgctaaggctgcttacctcgtgaaggcggagatacgaaagccaagtgag
ctcctgctgcttgccttcgcgaaagacgcggcgaccgagatgtcggagcgcatcgaagcc
aggtgcggagtccccgtggcagcacgaaccttccatgcgttggcctatgagatcatcggt
gaggtagaaggcgagaagccaccgttggcgccgacggcgacagacgacaaggcgtttctg
tcgctcatgaaggagatcctccggcacgtcgtggcgaccgccagcgatatcgcgcagaca
gtgatcggctggttcgccggtttcttcgacgacttcccaacagagtgggatttcaagacg
aagcacgaatggtatgcgcaaatcgaaagtcgcaacctgcggacgctgcaaggtgagatg
gtgaatagctttgaagagctgctgatcgccaactggctgttccggaacggcatcgcctac
gaatatgagccgagctacgagcacaaactccagaagactgggcgccgcacctacttgccc
gacttccggctaacagagagcagcgtctacatcgagcatttcggcgtgcgtaagaaacgc
ggcagggacggcgtggaggaattgtctacggcgccttacgtcgatcgcgatgaatacctc
gaaagcatggactggaaacggcaggtccatgccgagcacgagacggttctggtggaaacc
tacagttgggagcgtgaagatgacaggctgcttgaggcacttgccgaaaagctcgaacca
catgtcacgctgcggccgatcccagacattgagatctacgatcgtgtggccgaggtcggg
gtggtggacagcttcacttcgctgatgggcaccttcctgcgacactttaagaacggtggc
tatcgggtcgaggattgctccgacaaggcgcaaacactgaagttgggcaagcgggcggag
gccttcctcaagattttcggcgcggtctttcgcgagtatcagtcccgccttggcgaccgc
atcgacttcgaggacatggtgaaccgcgccacggagttcgtcgagagcgggcgctaccag
agcccgttccgccacatcctcgtcgacgagtttcaggacatctcgacaggtcgtgcgagg
ctgattcaggcactaaaacgccagcactccgatgccaaggtgtttgccgtcggcgacgat
tggcagtcgatctaccgctttgccgggtcggatatccacatcatgcgcaactttggagcg
gaattcggtggcacctattcaggggctactggagtccatcgcaccgtcgatctcggtcga
acctttcggtcggtggacaagatcgctctggccgcccgtcgcttcgttcttcgtaacccc
gctcagatcaccaaaacggtgataccggcaggcaaaactgacgaaccttcgatcaggatc
gcttggacgcgccgcgacaacggggagaagaccttgagcgacgcagtggccgctcttgcc
gccactgaaggtaaagaaggccggaagccgtccatccttatcctcgggcggtatcgtttc
ctgaggcccgatatagagcgtctccagcgtcagaaccccggggcgacgatcaacttcaag
accatccatgcatcgaaaggcctggaggccgatcacgtcatcatcctcggagccgacaac
gcaaggatgggctttccgtccatgatcgtcgacgaccctctgctcggcctggtatcgccc
gaggccgagccataccaaaatgccgaagagcggcgagtcatgtatgtcgccgtgacccgg
gcccgtcggactgtgaccatactcgcttccgaggcccgcccctccgtcttcgtcgaagag
ctgatgagtgaacctgagttcggcgtagtggtgcctttggatgctcaaaagcatacccac
acctgtccggcttgcggtgggcgtctgctacatatggccggaaaggacggtcgcgattgg
tatcgctgcgagcacgtgaagctgtgcggcagcagcatgtcggcttgtccggcctgcggt
gtcggccttccgatccattcccagaccaagggagaacttgtttgcactgattgcggggag
acccagcaggcttgccccagttgtgaagcaggatggcttgtcgaacggcgcggccgcttt
ggagcatttctcggctgtgtccgcttccctgactgtgctggaaaagccaagctaaagaaa
agcgcatga

DBGET integrated database retrieval system