Phaeobacter piscinae: PhaeoP14_03868
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Entry
PhaeoP14_03868 CDS
T05105
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase RfbC
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ppic
Phaeobacter piscinae
Pathway
ppic00521
Streptomycin biosynthesis
ppic00523
Polyketide sugar unit biosynthesis
ppic00541
O-Antigen nucleotide sugar biosynthesis
ppic01100
Metabolic pathways
ppic01110
Biosynthesis of secondary metabolites
ppic01250
Biosynthesis of nucleotide sugars
Module
ppic_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PhaeoP14_03868 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PhaeoP14_03868 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PhaeoP14_03868 (rfbC)
Enzymes [BR:
ppic01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PhaeoP14_03868 (rfbC)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
DUF2835
Motif
Other DBs
NCBI-ProteinID:
ATG41900
LinkDB
All DBs
Position
pP14_d:34028..34582
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AA seq
184 aa
AA seq
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MQIEDTDLPGVKILTPARFGDARGFFSECWNKARMAEAGLDVDFVQDNHSLSMEVGTLRG
LHFQAPPQAQAKLVRCGQGALFDVAVDIRKGSPTYGRWTGVELSATNGRQLLIPAGFLHG
FITRSPGTEVLYKCDAYYAPDCDGAVAWDSCGIDWGFEGTPVLSEKDAAAPRFEDFDSPF
VWEG
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgcagattgaagacacggacctgccaggggtgaagatcctgacaccggcgcggtttggc
gatgcgcgggggtttttctccgaatgctggaacaaggcgcggatggctgaggcggggctg
gatgtcgatttcgtacaggacaatcattcgctgtcgatggaggttggcaccctgcgcggg
ctgcattttcaggcgccgccccaggctcaggccaagctggtgcgctgtggtcagggggcg
ctgtttgatgtggcggtggatatccgcaaaggctcgcccacctatgggcgctggaccggg
gtggagctgtcggcgacaaacggccgccagctgctgatcccggcggggttcctgcatggg
ttcatcacccgcagccctggcaccgaagttctgtataaatgcgatgcgtattacgcgccg
gactgtgatggcgcggtggcctgggacagctgcggcattgactggggctttgagggcaca
ccggtgctttctgaaaaggatgctgcggcgccgcggtttgaagacttcgacagccccttc
gtgtgggaaggataa
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