Pyramidobacter piscolens: CE91St28_14050
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Entry
CE91St28_14050 CDS
T08073
Name
(GenBank) hypothetical protein
KO
K19789
DNA repair protein RadD
Organism
ppio
Pyramidobacter piscolens
Brite
KEGG Orthology (KO) [BR:
ppio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppio03400
]
CE91St28_14050
DNA repair and recombination proteins [BR:
ppio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
CE91St28_14050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
UPF0547
zf-ribbon_3
SWI2_SNF2
zinc_ribbon_2
AAA_22
DUF87
DZR
zf-NADH-PPase
DZR_2
zinc_ribbon_15
AAA_16
AAA_30
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
BDF78611
LinkDB
All DBs
Position
1495152..1496870
Genome browser
AA seq
572 aa
AA seq
DB search
MIPQLRDYQRRAIVMLYNWMARNAGNPCIVAPTGSGKSWIIAALCEDVLRQWPDSRILIL
SHVKELLSQDADKIVQAWPDAPVGLYSAGLGHRDVNRITVAGIQSVWKRPEELEKIDLSI
VDEAHLINHGDSGMYRSLLKDLKEQNPLLRIVGLTATPYRLGHGLITEGENRIFDGLIEP
VTIAELVARGFLAPLRSKLPAKTLDVEGVHKRGGEYVESELQLAVDTDANNAEIVRETIS
RAGERKAWLFFCTGVEHAFHMCDELRKAGVPAAVVVGDTPAAERAEILENFKSGRLKALT
NVDVLTTGFDYPGIDLLAMCRPTLSPGLYVQMAGRGMRIAEGKADCLVLDFAGNVATHGP
ITGVAVPKGKRAAEKKRVRKCPECDEIVATGVKVCPACGHEFPAPERKPQIMELHGRDDI
MGLEPSEMELRGWFWSVQHSSRNGLPMLRVDYDSRDFVRSISVSEYLCLMHGGFAEQKGF
KTLRYLMRCSGVADKYPDAMTLGVIKNEDELRELAQLMNEESRAPAKVYYVREGKYYRVV
SREWEEVKTDGDAAAELGPDGAGETLAAGSAG
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
ttgatcccccagctgcgggactaccagcggcgcgccatcgtcatgctctataactggatg
gcgcgtaacgcgggcaatccctgtatcgtcgcgccgacgggcagcggcaagtcgtggatc
atcgcggcgctgtgcgaggacgtcctgcggcaatggccggacagccgcattctgatcctc
tcgcacgtcaaagagctgctctcccaggacgccgacaagatcgtacaggcgtggccggac
gcgcccgtcggattgtattcggcggggctggggcacagagacgttaaccgcatcacggta
gccggcatccagtcggtttggaagcgccccgaggagctggaaaagatcgacctgtccatt
gtcgacgaggcgcatttaattaaccacggcgacagcggcatgtaccgctcgctgctgaaa
gacctgaaagagcaaaacccgctgctgcggatcgtggggctgacggcgacgccgtaccgc
ctcgggcacgggctgattaccgaaggcgagaaccgcatcttcgacggactgatcgaaccg
gtgacgatcgccgagctggtggcgcggggattcctggcgccgctgcggtcgaaactgccg
gcgaagacgctggacgtcgaaggcgtccataagcgcggcggggagtacgtcgaaagcgag
ctgcagctggcggtcgataccgacgccaacaacgcggagatcgtcagggagacgatctca
cgcgccggtgagcgcaaagcctggctgtttttctgcacgggcgtggagcacgccttccac
atgtgcgacgagctgcgaaaggccggagttcccgccgccgtggtggtaggggacacgccc
gccgccgaacgcgcggagattcttgaaaatttcaaatcggggcggctaaaggccctgacc
aatgttgacgtattgacgacgggttttgactatccgggcatcgacctcctggccatgtgc
cggccgacactctcgccggggctgtacgtgcagatggccggaaggggcatgcgcatcgcc
gaagggaaggcggactgcctggtgctggatttcgccggcaacgtggcaacgcacggcccg
atcacgggcgtagcggtcccgaagggaaagcgcgcggcggagaaaaagcgcgtgcgcaaa
tgtccggagtgcgacgagatcgtggcgacaggcgtaaaagtgtgccccgcctgcgggcac
gaattccccgcgccggaacggaagccccagatcatggagctgcacgggcgcgacgacatc
atggggttggagccgtcggagatggagctgcgcggctggttctggagcgtgcagcacagc
tccagaaacggactgccgatgctgcgggtggactacgactcgcgggatttcgtcaggtcg
atcagcgtcagcgagtatctgtgcctgatgcacggaggcttcgccgagcagaaaggattc
aaaacgctgcgctatctgatgcgctgttcaggcgtcgccgacaaataccccgacgccatg
acgctgggcgttatcaaaaatgaagacgagctgcgcgaactggcgcagcttatgaacgag
gaatcgcgggccccggcgaaggtgtactacgtcagggaaggcaagtactaccgcgtcgta
agccgcgaatgggaagaggtgaaaacagatggcgacgctgccgcggaactgggaccagac
ggcgccggagaaacgcttgccgccggaagcgcaggctag
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