Pseudomonas plecoglossicida: RK21_00324
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Entry
RK21_00324 CDS
T03646
Name
(GenBank) carbohydrate-selective porin OprB
KO
K07267
porin
Organism
ppj
Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppj02000
]
RK21_00324
Transporters [BR:
ppj02000
]
Other transporters
Pores ion channels [TC:
1
]
RK21_00324
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
AJG11832
UniProt:
A0A0B5KCI7
LinkDB
All DBs
Position
complement(339210..340544)
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AA seq
444 aa
AA seq
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MLQLPKTCYIGLALSALAAPSSASEMFASDSPWMLGDWGGTRSELLEKGYDFTLGYTGEM
GSNLHGGYDHDRTARYSDQFTFGSHLDLEKILGWNDTEFQLTITERHGDNISNDRINDPR
VGGFTSAQEVWGRGETWRLTQMWIKQKYFDGALDVKFGRFGEGEDFNSFPCDFQNLAFCG
SQVGNWVGGIWYNWPVSQWALRVRYNLSDALYAQVGVYEQNPSNLESGNGFKLSGSGTQG
AVMPIELVWSPQVNGLKGEYRAGYYYSNAKAQDVLKDSNGQPAALSGAAYRSSSSKHGLW
LGAQQQVTSLASDQSRGLSLFANATVHDKKTNAIDNYVQAGLVYKGPFDARAKDDIGFAL
ARVHVNPAYRKNARLVNQAAGIDDYDNPGFLPVQDTEYSAELYYGIHLADWLTVRPNLQY
IRHPGGVSQVDGALIGGLKIQSSF
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgctccaactgcccaaaacctgttacatcggccttgccctcagcgccctggcggctccc
agcagcgccagcgagatgttcgccagcgattcgccatggatgctcggcgactggggtggc
acccgcagcgaactgctggaaaaaggctacgacttcaccctcggctacaccggcgagatg
ggcagcaacctgcacggtggctacgatcacgaccgcaccgcgcgctacagcgaccagttc
accttcggcagccacctggacctggagaagatcctcggctggaacgacaccgaattccag
ctgaccattaccgagcgacacggcgacaacatcagcaacgaccgtatcaacgacccgcgt
gtcggcggcttcacctcggcccaggaggtctggggccgtggcgaaacctggcggctgacg
cagatgtggatcaagcagaagtacttcgatggcgcactggatgtgaaattcggccgtttc
ggcgaaggcgaagacttcaacagcttcccctgcgacttccagaacctggccttctgcggc
tcgcaggtaggcaactgggtaggtggcatctggtacaactggccggtcagccagtgggcc
ctgcgcgtccgctacaacctcagcgatgcgctctacgcccaggtcggcgtgtacgagcag
aacccctccaacctggagtcgggcaacggcttcaagctcagcggcagcggcacccaaggc
gcggtaatgccgatcgaactggtatggagcccgcaggtcaatggcctgaaaggggaatat
cgcgccggctactactacagtaatgccaaggcacaggatgttctcaaggacagcaatggc
cagccggcagccctcagcggcgccgcctaccgcagcagttcgagcaagcacggcttgtgg
ctcggcgcccagcagcaggtgacttcgctggcgtccgaccagtcgcgtggcctgagcctg
ttcgccaacgccacggtgcacgacaagaagaccaatgccatcgacaactatgttcaggca
ggactggtatacaaagggccattcgacgcccgcgccaaggacgacatcggtttcgccctc
gcccgcgtgcacgtcaaccctgcctatcgcaagaacgcgcgtctggtcaaccaggccgcc
ggcatcgacgactatgacaaccccggtttcctgccggtacaggacactgagtacagcgcc
gagctgtattacggcatccacttggccgactggctcacggtacgccccaacctgcagtac
atccgccacccgggcggggtgtcgcaagtcgatggcgccctgatcggcggcctgaagatc
cagagcagtttctaa
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