Pseudomonas plecoglossicida: RK21_00838
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Entry
RK21_00838 CDS
T03646
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj03030
DNA replication
ppj03430
Mismatch repair
ppj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RK21_00838
03430 Mismatch repair
RK21_00838
03440 Homologous recombination
RK21_00838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppj03032
]
RK21_00838
03400 DNA repair and recombination proteins [BR:
ppj03400
]
RK21_00838
Enzymes [BR:
ppj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RK21_00838
DNA replication proteins [BR:
ppj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RK21_00838
DNA repair and recombination proteins [BR:
ppj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RK21_00838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_5
AAA_22
ResIII
AAA_14
TIP49
AAA_30
AAA_19
PIF1
AAA_16
AAA_18
AAA_2
TsaE
nSTAND3
AAA_7
HasA
SKI
Rad17
Herpes_Helicase
zf-CXXC
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AJG12346
UniProt:
A0A099N1X3
LinkDB
All DBs
Position
908321..910393
Genome browser
AA seq
690 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDNQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSTPCGTCSVCREIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSTHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMSP
ERVVEHLSHVLAAENVPFEPDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVLAADVRAM
LGSLDHGQVYGVLQALLEGDARALLEAVRNLAEQGPDWAGVLAEMLNVLHRVAIAQALPE
AVDNGQGDRERVLALASALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
ADTDDAPKPVLKPVGISQATADPATPVAAPAVAVAPPAAAVVAPVAPVAEQQVQAPAPVE
PAPQPVVEPVVAAEPAPVSEPEPAPEPVAEVVDLPWEEPAPTPAPVVAEPAPAPAPAAVP
TPAPAAPAHDDEPPFDPSAYAAVGMDRDDEPPLDEDYYGGESDPVGFSYLDELAEHVQEE
APKPAAVPLPAAKPATGLALQWLELFPQLPVSGMTGNIAANCTLIAVDGDDWLLHLDPGQ
GALFNATQQRRLNEALNQHLGRTLNLRIELILPEQETPAQAAARKRAERQQDAVTSIEQD
PLIQQMIKLFGAKVRQDTIEPVEALVNQGQ
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgtccgcgctcgttccgcgaaatggtcggc
cagacccatgtgctcaaggccttgatcaatgccttggacaaccagcgcctgcaccatgcc
tatctgttcactggtacccgaggtgtgggcaagacgaccattgcccgtatcatcgccaag
tgcctgaactgcgaaaccggcatcacctcaacgccctgcggtacctgttcggtgtgccgg
gagatcgacgaaggccgtttcgtcgacctgatcgagatcgacgccgccagccgcaccaag
gtcgaggacacccgcgaactgctcgataacgtgcagtacgccccgagtcgtgggcgcttc
aaggtctacctgatcgacgaagtgcacatgctctcgactcactcgttcaacgccttgctc
aagacgctggaagagccaccgccctacgtcaagttcatcctcgccaccactgacccgcag
aaactgccggccaccatcctgtcgcgctgtctgcagttctcgctgaagaacatgagcccg
gagcgggtggtcgagcacctcagccatgttctggccgccgagaacgtgccgttcgagccg
gatgccctgtggctgctggggcgcgcggccgatggctcgatgcgcgacgccatgagcctg
accgaccaggccatcgcctttggcgaaggcaaggtactggccgccgatgtgcgggccatg
ctcggcagccttgatcatggccaagtctacggggtgctgcaggcgttgctcgaaggcgat
gcccgggccttgctcgaggccgtgcgcaacctggccgagcagggcccggactgggctggc
gtgctggccgagatgctcaatgtgctgcaccgcgtggccattgcccaggcgctgccggaa
gcggtggacaacggccagggcgaccgtgagcgggtgctggcgctggcctcggcattgcca
gccgaggacgtgcagttctattaccagatgggcctgataggccgccgtgacctgccactt
gcgccggacccgcgcggcggcttcgaaatggtcctgctgcgcatgctcgcgttccgcccc
gctgacaccgacgacgcgccgaagccggtactaaagccagtggggatcagccaggccaca
gctgatcctgcaacaccggtggcagcgccggcggttgccgtggcgccgccggccgctgct
gtcgtggcgccggttgcaccggttgccgagcaacaagtgcaggcgcccgcaccggtcgaa
ccagcgccacagccggttgtcgagcctgtggtggcagctgagcctgccccggtcagtgaa
cctgagccagcaccagaacccgtggcagaggtggttgacctgccatgggaagagcccgcg
ccaacgcccgcaccggtagtggccgagcctgcgccggctcctgcaccggccgctgtgccc
acgccggcacctgccgccccggcacacgacgacgagccacccttcgacccgtccgcctat
gccgccgtgggcatggaccgcgacgatgaaccgccactggacgaagactattacggcggc
gaaagcgacccggtcggcttcagctacctggacgaactggccgaacacgtccaggaagaa
gcacccaagccggcagccgtaccgctgcccgcagccaagccggctaccggcctggccctg
caatggctggaattattcccacagttgcctgtatccgggatgacaggcaacatcgcggca
aactgtacattgattgccgtcgatggcgacgactggctgctgcacctggaccctggccag
ggtgcgctgttcaacgccacccagcaacggcgccttaacgaagcgctcaaccagcacctg
gggcgcacgctgaacctgcgcatcgagctgatcctgcccgagcaggaaaccccggcccag
gcagcggcgcgcaaacgcgccgagcgccagcaggacgcggtcacctcgatcgagcaggat
ccgttgatccagcagatgatcaagttgttcggcgccaaggtgcggcaggatactattgag
cctgtagaagccctggttaatcagggccagtaa
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