Pseudomonas plecoglossicida: RK21_01131
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Entry
RK21_01131 CDS
T03646
Name
(GenBank) acetyl-CoA carboxylase, biotin carboxylase
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj00280
Valine, leucine and isoleucine degradation
ppj01100
Metabolic pathways
Module
ppj_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RK21_01131
Enzymes [BR:
ppj01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
RK21_01131
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GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
MCC_alpha_BT
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
HlyD_3
ATP-grasp_3
GARS_A
HlyD_D23
ATP-grasp_5
ATPgrasp_ST
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
AJG12639
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Position
complement(1229245..1231197)
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AA seq
650 aa
AA seq
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MSRPALTTLLVANRGEIACRVMRTAKAMGLTTVAVHSATDRDARHSREADIRVDLGGTKA
AESYLLVDKLLAAAKASGAQAIHPGYGFLSENAGFARAIEEAGLIFLGPPASAIDAMGSK
SAAKALMEAAGVPLVPGYHGEAQDLDTFRAAAERIGYPVLLKASAGGGGKGMKVVEEESQ
LADALASAQREAQSSFGDARMLVEKYVLKPRHVEIQVFADQHGNCLYLNERDCSIQRRHQ
KVVEEAPAPGLSAELRRAMGEAAVRAAQAIGYVGAGTVEFLLDARGEFFFMEMNTRLQVE
HPVTEAITGLDLVAWQIRVACGEALPITQEQVPLIGHAIEVRLYAEDPANEFLPATGKLA
LYRESAAGEGRRVDSGVSEGDVVSPFYDPMLGKLIAWGEDREQARLRLLAMLDEFAIGGL
KTNIAFLRRILAHPAFAAAELDTGFIPRHQEVLLPAPQALPAGFWEAAAEAWLQGQAAHQ
REDDRSSPWAERNGLRLGLPARSSLHLVSGGQDQAVALERSAASTWQLLGEQLVHDQAGV
RRQHLAIRRGGTLYLHWDGEMHAIEAFDPIAEAEASHSHQGGLGAPMNGSIVRVLVEPGQ
VVEAGTALVVLEAMKMEHSIRAPHGGTVKALFCQEGDMVSEGTVLVELAE
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgagccgccccgctttgaccaccctgctggtcgccaaccgcggcgaaatcgcctgccgg
gtgatgcgcaccgccaaggccatgggcctgaccaccgtggccgtgcacagtgccaccgac
cgtgatgcccggcacagccgcgaagccgatatccgcgtcgacctcggcggcaccaaggct
gccgaaagctacctgctggtcgacaagctgctggccgcagccaaggccagcggcgcccag
gccatccacccgggctatggcttcctgtccgagaacgcaggcttcgcccgtgccatcgaa
gaggccgggttgatcttcctcggcccaccggccagcgccatcgacgccatgggcagcaag
tcggcggccaaggcactgatggaagccgctggcgtgccactggtgccgggctaccatggc
gaagcccaggacctggacaccttccgcgccgccgccgaacgcatcggctacccggtgctg
ctcaaggccagcgccggcggcggtggcaagggcatgaaagtggtcgaagaagaaagccag
ctggccgacgccctggcctcggcccagcgtgaggcgcagtcgtcgttcggcgatgcgcgc
atgctggtggaaaagtacgtgctcaagccgcgccatgtggaaatccaggtattcgccgac
cagcacggcaactgcctgtacctcaacgagcgtgactgctcgatacagcgccgccaccag
aaagtggtggaagaagcccctgcgccaggtctgtcagccgaattgcgccgggccatgggt
gaggcggcggtacgcgcggcccaggccatcggctacgtgggcgccggcaccgtggagttc
ctgctcgatgcccgtggcgagttcttcttcatggagatgaacacccgcctgcaggtggag
cacccggtcaccgaggccattaccgggcttgatctggtggcctggcagattcgcgtggcc
tgcggcgaggccctgccgatcacccaggaacaggtgccgctgataggccatgccatcgaa
gtgcgcctgtatgccgaggacccggccaacgaattcctgcccgcgaccggcaagctggcg
ctgtaccgcgagtcggcagccggcgaagggcgacgggtggacagcggggtcagcgagggt
gatgtggtgtcgccgttctacgacccgatgctgggcaagctgatcgcctggggcgaagac
cgcgagcaggcgcgcctgcgcttgctggccatgctcgacgaatttgccattggcgggttg
aagaccaacatcgccttcctgcggcgcattctcgcccacccggcgtttgctgcagcggag
ttggatactggcttcattccgcgtcaccaggaggttttgctgcccgcgccgcaagcgctg
ccggcaggcttctgggaagccgcggccgaggcctggttgcagggccaggccgcacaccag
cgggaggacgaccgcagttcgccgtgggccgagcgcaacggcctgcgcctgggcctgccg
gcgcgcagcagcctgcacctggtcagtggcgggcaggaccaggcagtcgccctggagcgc
agcgctgcgtctacctggcagttgctgggcgagcagttggtgcatgaccaggctggtgtg
cgtcgccagcatctggcgatccgccgcggtggcacgctgtacttgcactgggacggcgag
atgcatgccatcgaagctttcgacccgattgccgaggccgaggccagccacagccaccag
ggcggcctgggcgcgcccatgaacggcagcatcgtgcgggtgctggtggagcctgggcag
gtggtggaagcaggtacggcgctggtagtgctggaggccatgaagatggagcacagcatt
cgcgcgccgcatggcggcacggtgaaggcgttgttctgccaggaaggggatatggtcagc
gaagggacggtgctggtcgaactggcggagtaa
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