Pseudomonas plecoglossicida: RK21_01790
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Entry
RK21_01790 CDS
T03646
Name
(GenBank) alcohol dehydrogenase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RK21_01790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppj03400
]
RK21_01790
Enzymes [BR:
ppj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RK21_01790
DNA repair and recombination proteins [BR:
ppj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RK21_01790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AJG13298
UniProt:
A0A0B5JZ07
LinkDB
All DBs
Position
1922991..1923920
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AA seq
309 aa
AA seq
DB search
MPKLTPLHAVRRSLPTPGHHTLWLRYRAPYHWPSTLAFLAARCIPGIETCLDGTYRRTLV
IAGRHAVLHATPSGTQYLRVRLEGVPADALPGLIARLRRAFDLDADPARINAELSRDPLM
ARLLQERPGLRVPQGWDACEQAMRTVLGQQVSVAGAMTLAGRLVQRHGVPLRWPAPGLSH
VFPALPVLAVAKFDGMGMPRARAATLGTLANALLAEPRLLRRGQVLDELLRNLCQLKGIG
PWSAHYLALRQAGAADALPLGDVALIKALRLLEGEDAQLAQRALAWRPWRAYAAQHLWAS
LGPVGTARR
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagctcacccccctgcacgccgtacgccgatcattgcccacccccggtcaccac
accttgtggctgcgctaccgtgccccttaccactggccctcgaccctggccttcctcgct
gcccgctgcatccccggcatcgagacctgcctcgacggcacctaccgccgtaccctggta
attgccggccgacacgccgtcttgcacgccacaccttcgggcacccagtacctgcgggtc
cgccttgaaggcgtcccggctgacgcgctacccggcctgatcgccaggctgaggcgggcc
ttcgatctcgatgccgaccccgcgcgcatcaatgccgaactgtcccgcgatccgctgatg
gcccgcctgctacaggagcgcccaggcctgcgcgtgccacaaggctgggacgcctgcgaa
caggccatgcgcactgtgctgggccagcaagtcagtgtggccggggccatgaccctggcc
ggccgcctggtgcaacgccacggcgtgcccttgcgctggcccgcacctggcctgagccac
gtattcccggcgttgccggtattggcagttgcgaagttcgatggcatgggcatgccgcga
gcgcgcgccgccaccctgggcacgctggccaatgcattgctcgccgagcccaggttgctg
cgccgcgggcaggtgctggatgaactgctgcgcaacctgtgccagctcaagggtatcggc
ccctggagtgcgcactacctggcattgcgccaggccggcgcggccgatgccttgccgctg
ggcgatgtggcgttgatcaaggcgttgcgcctgctcgaaggcgaggacgcccaacttgcg
caacgagcccttgcctggcgaccgtggcgagcctatgcggcacagcatctttgggcatcg
ctagggcctgtcgggaccgctcgtcgctaa
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