Pseudomonas plecoglossicida: RK21_03280
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Entry
RK21_03280 CDS
T03646
Name
(GenBank) helicase SNF2
Organism
ppj
Pseudomonas plecoglossicida
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SNF2_assoc
SWIM
AAA_22
Glyoxalase
Motif
Other DBs
NCBI-ProteinID:
AJG14788
UniProt:
A0A0B5K320
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Position
3436187..3439495
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AA seq
1102 aa
AA seq
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MSRDALQLLREYPNWTQSFTGPVLQRGERYAREDRVEIESCIGALVEASCRGSEGSPYRQ
KITLTALAGRCHVRGQCSCPVGHNCKHCAAALFVLSEQQATIKSHGDALPADLQRWLKGL
EQPAQEPAETQDKRGRMVCYQLRLTDEPGCALRVRKGTREDQGVRYSRVQSLYDFLYEPP
RFVKEDDIRILRLLSALNQAGSQDRGYQLKGREGGELFQRALDTGRMLFDENKPLLREGP
TLAAEFRWVRLDNGHYRGIWYHGETPLNCVIALLPLYYFDFTGSVVGKLEHSLDPHIALQ
LTIAPDVPEHLVVPLSHKLNALNHQLPTPTTLDEQLIDDLQPRPYLTLGSLEFSAYMPKT
GRMQRQMQHRAALAFDYDGLRTSGSDDKPLTRLVGDTCQRIRRQPQAEQALRKVLRDLGF
KAATRQSKALPDSAGEMLQLPDDEAWLRFAREGLPRLREAGWDIDIHRDFAFNLQEVDDW
YATIDEAPGHEWFDLELGIVVDGQRHSLLPIVLQLLRSNPELLRPSELARRSDDEHLLID
LNRGRLDAPALRVALPYGRIKAVMGTLGELYLHEDAAGPSLRLDRADAARLNEIDSLPLH
WEGGEHVRDLGRRLRDARDLQVEPPTGLQASLRPYQQQGLNWLQALREMGTGGILGDDMG
LGKTLQALAHLLLEKQSGRLSAPALAVMPTSLVPNWLDEAQRFAPGLRVLALQGPGRSKY
FAKLHEYDLVLTTYALVPRDLEHLRAHAWHVLVLDEAQNIKSSTSKAALAVCELRANQRV
CLTGTPMENNLGELWSIFHFLMPGWLGDLKRFNQDYRTPIERHGDSERMAHLASRIRPFL
LRRTKEQVATELPAKTEMVHWVELSDAQRDTYEAVRVAMDKKVRDEIARNGAARSQIVIL
DALLKLRQVCCDLRLVKGVESKGNQADKGKLGALLEMLEELLSEGRRVLLFSQFTSMLAL
IEQELEKRKIRYSLLTGDTRDRRTPVQQFQQGDSEVFLISLKAGGVGLNLTAADTVIHFD
PWWNPASENQATDRAYRIGQDKPVFVFKLITRGTVEEKIQLLQQEKAALAASLLDGGQAG
QWRLGDEEIEALFAPLPGKRGR
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtgacgctctccagttgctgcgcgagtacccgaactggacccagtcgttcacc
ggcccggtcctgcaacgcggcgagcgttacgcccgggaagaccgggtagagatcgaaagc
tgcatcggcgcgctcgtcgaagccagctgtcgtggcagcgagggcagcccttatcggcag
aagataaccctcaccgccctggctggccgctgccatgtacgcggccagtgcagctgcccc
gtggggcataactgcaagcattgcgccgccgcgctgttcgtccttagcgaacaacaggca
acgataaaaagtcatggtgacgcattaccggccgatctgcagcgctggctgaaaggtctc
gaacagcctgcgcaggagcctgccgaaacccaagacaaacgtgggcgcatggtttgctac
caactcaggctgaccgatgagcccggctgcgcgctgcgggtacgcaaaggcactcgcgaa
gaccagggcgttcgctatagccgtgtgcagtcactctacgatttcctttacgaacccccg
cgcttcgtcaaggaagacgatatccgcatcttgcgcctgctttcggcgctcaatcaggcc
ggcagccaggaccgcggctaccagctcaaaggccgggaaggcggcgaactgttccagcgc
gcgctggataccggccgcatgctctttgacgaaaacaagcccctgctgcgcgagggccct
acgcttgcggccgagtttcgctgggtgcggctggacaatggtcactatcggggcatctgg
taccacggtgaaacgccgctgaactgcgtgattgcgctgctgccactttactatttcgat
ttcaccggcagcgtggtgggcaagctcgagcacagcctcgatccgcatattgccctgcaa
ctgaccatcgctcctgacgttccggaacaccttgtcgtgcccctcagccacaagctcaac
gccttgaaccaccaactccctacgccgaccacgctggacgaacaactcattgacgacctg
caacccaggccgtacctgaccctgggcagcctcgaattcagcgcctacatgcccaagacc
ggccgcatgcaacggcagatgcaacaccgtgccgcgctggcattcgactacgacggcctg
cgaaccagcggcagcgacgacaagccgctgacccgcctggtcggcgatacctgccagcgc
atccgccgccagccccaggccgaacaggcgcttcgcaaggtgctgcgcgacctcggtttc
aaggccgccacccggcagagcaaggccctgccagacagtgccggcgagatgctccagttg
cccgatgacgaagcctggctgcgctttgcccgagaaggcctgccgcgcctgcgcgaagca
ggttgggacatcgacatccaccgtgacttcgctttcaacctgcaggaggtggatgactgg
tacgccaccatcgacgaagcgcccggccatgaatggttcgacctggagctgggcatcgtg
gtcgatggccagcgccacagcctgctgccgatcgtgctgcagctgctgcgcagcaacccg
gaactgctgcgccccagcgaactggcccggcgcagtgacgacgagcacctgctgatcgac
ctcaaccgtggtcgcctcgacgccccagccctgcgcgttgccttgccctatggccgtatc
aaggcagtgatgggcaccctgggcgaactgtacctgcacgaagacgccgctggcccctcc
ctgcgcctggaccgtgccgatgccgcacgcctgaatgaaatcgacagccttcctttgcac
tgggaaggtggcgagcatgtacgcgacctgggccgacgcctgcgcgatgcccgtgacttg
caggtagaaccgcccaccgggttgcaggcaagcctgcgcccttaccagcaacagggcctg
aactggctacaagcgctgcgcgagatgggcaccggcggcatcctcggcgacgacatgggg
ctgggcaagacactgcaggccctggcacacctgctgctggaaaaacagtccggccgcctg
agtgctccagccctggcggtgatgccgaccagcctggtgcccaactggctggacgaagcc
cagcgcttcgcccccgggctgcgcgtgctggccctgcaaggcccggggcgcagcaagtat
ttcgccaaattgcacgaatacgacctggtcctgaccacctatgccctggtgccgcgcgac
ctcgagcacctgcgcgcccatgcctggcatgtgctggtgctggacgaggcgcagaatatc
aagagcagcaccagcaaggccgccctcgcagtttgcgagctgcgggccaatcagcgcgtc
tgcctgaccggcacgccaatggaaaacaacctgggcgagctgtggtcgattttccacttc
ctcatgcctggctggctgggtgacctgaagcgcttcaaccaggactaccgcacaccgatc
gagcgccacggcgacagcgagcgcatggcccacctggccagccgcatccgcccgttcctg
ctgcgccgcaccaaggagcaggtggcgaccgagctgccggccaagaccgagatggtgcac
tgggtcgagcttagcgatgcccagcgtgacacctacgaggccgtgcgggtggccatggac
aagaaagtccgcgatgaaatcgcccgcaatggcgccgcgcgcagtcagatcgtcatcctc
gacgccctgctcaagctgcgccaggtatgctgcgacctgcgcctggtcaaaggggtggaa
agcaaaggcaaccaggccgacaagggcaaactgggcgcgctgctggaaatgctcgaagag
ttgctgagcgaagggcgccgggtgctgctgttctcgcagttcacctcgatgctggcgttg
atcgagcaggaactggagaagcgcaagattcgctacagcctgctgaccggcgacacccgc
gaccggcgcacgccggtgcagcagttccagcagggtgacagcgaagtgttcctgatcagc
ctcaaggcgggtggcgtgggcttgaacctgacagccgcggacacggtgatccacttcgac
ccctggtggaacccggccagcgaaaaccaggctaccgaccgcgcctaccgcattggccag
gacaagccggtattcgtgttcaagctgatcacccggggaacggtggaagaaaagatccag
ctgttgcagcaggagaaggcggcgctggcggcgagcctgctggatggcgggcaggccggg
caatggcggctgggggatgaagagatcgaagcgctgtttgcgccgctgcccgggaagcgc
gggcggtag
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integrated database retrieval system
