Pseudomonas plecoglossicida: RK21_03616
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Entry
RK21_03616 CDS
T03646
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj00521
Streptomycin biosynthesis
ppj00523
Polyketide sugar unit biosynthesis
ppj00541
O-Antigen nucleotide sugar biosynthesis
ppj01100
Metabolic pathways
ppj01110
Biosynthesis of secondary metabolites
ppj01250
Biosynthesis of nucleotide sugars
Module
ppj_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
RK21_03616
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RK21_03616
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RK21_03616
Enzymes [BR:
ppj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
RK21_03616
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AJG15124
UniProt:
A0A0B5K922
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Position
complement(3807004..3807558)
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AA seq
184 aa
AA seq
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MYQMKATKQVIPEVILFEPQVFGDNRGFFLESFNQRVFDEVVGRPVTFVQDNHSRSVKGV
LRGMHYQIQQPQGKLVRVVQGEVFDVAVDMRKSSPTFGKWVGVHLSAENKHQLWVPEGFA
HGFVVLSETAEFLYKTTDFYAPQFDRSLAWNDPTVGIQWPFDGEPSLSAKDQKASAFADV
DAFA
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaaatgaaagcaacaaagcaagtcatcccggaggtcatcctttttgaaccccag
gtatttggcgataaccgtggtttcttcctggaaagcttcaaccagcgggtgttcgatgag
gtggtgggtcgcccagtaacctttgttcaagacaaccactcccggtcggtgaaaggtgtg
ctcagagggatgcactaccagatccagcaaccccagggcaaactggttcgcgttgtacag
ggtgaagtcttcgacgttgccgtcgacatgcgtaaaagctccccaaccttcggcaagtgg
gtcggtgttcacctgagcgccgaaaacaagcatcagctgtgggtgccggagggctttgcc
catggctttgtggtgctttccgaaaccgccgagttcctatacaaaaccacagacttctac
gcgccgcagtttgatcgcagcctggcgtggaacgacccgactgtcggcattcaatggccg
ttcgatggggaaccctcactgtcggccaaagaccagaaggccagcgcatttgcggatgtc
gacgctttcgcctga
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