Pseudomonas plecoglossicida: RK21_03952
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Entry
RK21_03952 CDS
T03646
Name
(GenBank) carbohydrate-selective porin OprB
KO
K07267
porin
Organism
ppj
Pseudomonas plecoglossicida
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppj02000
]
RK21_03952
Transporters [BR:
ppj02000
]
Other transporters
Pores ion channels [TC:
1
]
RK21_03952
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
AJG15460
UniProt:
A0A099MUE0
LinkDB
All DBs
Position
complement(4149383..4150735)
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AA seq
450 aa
AA seq
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MEQRKRIRTLGSLALLAPLAMAVGSSVQAAEAFSSESKWMTGDWGGTRTELLEKGYDFTL
DYVGEVAGNLHGGYNDDKTARYSDQFALGAHLDLQKIFGWHDAEFKLAITERSGRNLSND
RISDPRAGQFSSVQEVWGRGQTWRLTQMWVKQKYFDGALDVKFGRFGEGEDFNSFPCDFQ
NLAFCGSQVGNWVGGIWYNWPVSQWALRVKYNITPEFFVQVGAFEQNPSNLETGNGFKLS
GSGTKGAILPVEAVWSPKVNGLPGEYRLGYYYSTAKADDVFDDVNGNPQALTGEAFKSHS
SKHGWWVVAQQQVTAHGGDVNRGLSLFANFTVHDKATNVVDNYQQLGLVYKGAFDARPKD
DIGFGVARIHVNDDVKKRAELLNAQSGISDYDNPGFVPLQRTEYNAELYYGFHVTNWLTV
RPNLQYIKSPGGVDEVDNALVAGLKIQSSF
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggaacagcgcaaacgcatcaggacattgggctcgctggccttgctcgcgccactggcg
atggctgttggcagcagcgttcaggctgccgaagctttctccagcgaatcgaagtggatg
accggcgactggggcggcacccgcaccgagttgctggaaaagggctatgacttcaccctc
gattacgtcggcgaggttgccggtaacctgcacggtggatacaacgacgacaagactgcg
cgctacagcgaccagttcgccctcggcgcgcacctggacctgcagaaaatctttggctgg
cacgacgccgagttcaagctggcgatcaccgagcgcagcggccgcaacctgtccaacgac
cgcatcagcgacccgcgcgccgggcagttcagctcggtgcaggaggtgtggggccgcggc
cagacctggcgcctgacccagatgtgggtcaagcagaagtacttcgacggcgcactggac
gtgaaattcggccgcttcggcgagggcgaggacttcaacagtttcccctgcgacttccag
aacctggccttctgcggctcgcaggtgggcaactgggttggcggcatctggtacaactgg
ccggtcagccagtgggcgctgcgggtgaaatacaacatcaccccggaattcttcgttcag
gtcggtgccttcgagcagaacccttccaacctggaaaccggcaacggcttcaagctcagt
ggcagcggcaccaaaggcgcgatcctgccggtggaagcggtgtggtcacccaaggtcaat
ggcctgccgggcgagtaccgcctgggttattactacagcacggccaaggccgacgatgtg
ttcgatgacgtcaacggcaacccgcaggcgctgacgggcgaggccttcaagtcgcactcc
agcaagcatggctggtgggtggtggcacagcagcaggtcactgcccatggcggcgatgta
aaccgtggcctgagcctgttcgccaacttcaccgtgcacgacaaggccaccaacgtcgtc
gacaactatcagcaactgggcttggtctacaaaggcgcattcgacgcccggcccaaggac
gatatcggcttcggcgtggcgcgcattcatgtgaatgacgatgtgaagaaacgcgccgaa
ctgctcaacgcccagagcggcatcagcgattacgacaacccaggcttcgtgccgctgcag
cgtaccgagtacaacgccgagctctactacggcttccacgtcaccaactggctgaccgtg
cggcccaacctgcagtacatcaagagccccggcggcgtggatgaggtggacaacgcgctg
gtcgcagggttgaagattcagtcgtcattctga
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