Pandoraea pnomenusa 3kgm: U875_24320
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Entry
U875_24320 CDS
T02936
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ppk
Pandoraea pnomenusa 3kgm
Pathway
ppk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
U875_24320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppk03400
]
U875_24320
Enzymes [BR:
ppk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U875_24320
DNA repair and recombination proteins [BR:
ppk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
U875_24320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
PriA_CRR
Helicase_C
zinc-ribbons_6
zf-CHY
AAA_16
ADDB_N
HypA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHB08095
LinkDB
All DBs
Position
complement(5302586..5304970)
Genome browser
AA seq
794 aa
AA seq
DB search
MPTIARVALDTPLPTLFDYRLDQAATLGQLVQVPFGRRQVVGVVWELTQRSDVPSAKLRD
VTSVWHELPALGDDWRDLMQFAARYYQRGIGEVALPAVPGHLRTPMRWSRLLARRGVQRY
RLADGALPALMENVPARLRAQRRLAEGLAQAGTLDADEARALCAKAADVLKQWAAAGWVV
VETVPFHETVREADECSDVMDGMDELRVSGATEHPVADAAPGAAPGRTLTAGQADAVAAI
HGALVAAGARRLAATQAKPDTTPADDAPACTPFLLYGVTGSGKTEVYLRAVAEALREPEA
QVLVLVPEINLTPQLEGVFRTRFPNETLVTLHSGLAEGERARHWLAAHRGEARVVLGTRL
AIMASLPHLRLIVIDEEHDPSYKQQEGLRYSARDLAIWRANRLRIPVVLGSATPSLDSWR
RADQGRYVRLAMPERATPDAVLPRVSLIDMEIERKRQRAVHEGLSQPLLAALRARLDAGE
QSLLFLNRRGYAPVLNCDACGWISDCRRCSAHMVLHKPERRLRCHHCGAEARIPHACPDC
GNLDLAPLGRGTQRIEEALTAHFPDARLARIDADSTRRKGSAQALFAQVHAGEVDILIGT
QMVAKGHDFRNVTLVGVVNADSALFSHDFRAAERLFAQLMQVAGRAGRAARADGPGDVLI
QTRYASHPLFAALMRHDYPGFAAQQLEERRVALLPPFTHQALLRAEARKLDDAMAFLRQA
REIAATPALNDPRISLWDPVPMTMVRIAGTERAQLVVESPHRGALQRFLTRWMSELRTLR
APVRWHLEVDPLEI
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
gtgcccactatcgcccgcgtggccctcgatacgccacttcccaccttgttcgactatcgt
ctcgatcaggccgcgaccctcggtcaactggtccaggttccgttcggacgacgacaggtg
gtgggtgtcgtctgggaattgacgcagcgcagcgacgttccgtccgcgaagctgcgcgac
gtgacatcggtatggcacgaattgccggcgctcggcgacgactggcgcgacctgatgcag
tttgccgcgcgttattaccagcgcggcattggggaagtggcgctgcccgccgtgcccgga
catcttcgtacgccgatgcgatggtcgcgcctgctcgcccggcggggcgtgcagcgctat
cgcttggccgacggtgcgctgccggcgctcatggaaaacgtgcccgcccggctgcgcgcg
cagcgccgcctggccgaaggactggcgcaagccggcacgctggacgccgacgaggcgcgc
gccctctgcgcgaaagcggccgacgtgctcaagcagtgggccgccgccggctgggtcgtg
gtggaaacggtgccgtttcatgaaacggtgcgcgaagcggacgaatgcagcgacgtcatg
gacgggatggacgagttgcgcgtctcgggcgccacggaacaccccgtggccgatgctgca
cctggtgccgcccccggccgcaccctgacggccggccaggccgacgccgtggccgccatt
cacggggcgctcgtcgccgccggggcacggcgcctcgccgccacgcaggcgaagccggac
acgacgcccgccgacgacgcgcctgcgtgcacgccgttcctcctttacggggtgaccggc
agcggcaagaccgaggtgtacctgcgcgccgtcgccgaagcgctgcgcgagcccgaggcc
caggtgctcgtgctcgtacccgagatcaacctgacgccgcagctcgaaggcgtctttcgc
acgcggttcccgaacgagacgctcgtcaccctgcacagcgggctggccgaaggcgagcgc
gcccggcattggcttgcggcgcaccgcggcgaagcgcgcgtggtgctcggcacacggctg
gcgattatggcgtcactgccgcatctgcgcctgatcgtgatcgacgaagagcacgatccg
tcgtacaagcagcaggagggcctgcgctattcggcgcgagacctcgccatctggcgggca
aaccggttgcgcattccggtggtgctcggctcggccacgccgtcgctcgacagctggcga
cgcgccgatcagggccggtacgtgcgactcgccatgcccgagcgcgcaaccccggacgcg
gtgctgccgcgcgtgtcgctcatcgacatggaaatcgagcgcaagcgccagcgcgccgtt
cacgaagggttgtcgcaaccgctgctcgccgctctccgcgcgcgtctcgacgccggcgag
caaagcctgctgttcctgaatcgacgcgggtacgcgcccgtgctcaactgcgatgcctgc
ggctggatcagcgactgccgccgttgcagcgcgcacatggtgctgcacaaaccggaacgc
cgcctgcgttgtcatcattgcggcgccgaagcgcgcatcccgcacgcctgccccgactgc
ggcaacctcgatctcgcgccgctcggtcgcggcacccaacgcatcgaggaagcgctgacg
gcccatttccccgacgcgcggctcgcccgcatcgacgccgacagcacgcgccgcaagggc
agcgctcaggcgctcttcgcgcaggtccacgccggcgaggtcgacatcctcatcggcacg
caaatggtcgccaagggacacgacttccgcaatgtcacgctcgtgggcgtggtcaacgcc
gacagcgcactgttctcgcacgactttcgggccgccgaacgactcttcgcacaactcatg
caggtggccggtcgcgccggccgggccgcccgggccgacggccccggcgacgtgctgatc
cagacgcgctacgcgtcgcacccgttgttcgcggcgctcatgcgtcacgactaccccggc
tttgccgcgcagcagctcgaggagcgacgcgtcgcactgctgccgccgttcacgcaccag
gccctgctgcgcgccgaggcccgcaagctcgacgacgccatggctttccttcggcaagct
cgtgagatcgccgccaccccggcgctgaacgacccgcgcatctccctgtgggatccggtg
ccgatgacgatggtccggatcgcgggcacggagcgtgcgcaactcgttgtggagagcccg
caccggggcgcgctccagcgctttctcacgcgatggatgagcgaactgcgcaccctccgg
gccccggtgcgatggcacctcgaagtggatcctctcgaaatataa
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