Pleuronectes platessa (European plaice): 128448347
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Entry
128448347 CDS
T09923
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pplt04121
]
128448347
Ubiquitin system [BR:
pplt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128448347
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
SPRY
U-box
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-RING_10
zf-RING_6
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
128448347
NCBI-ProteinID:
XP_053286927
LinkDB
All DBs
Position
2:27142939..27145004
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AA seq
561 aa
AA seq
DB search
MEEQENRLDREIFCCPICLDLLKDPVTTGCGHSYCKSCINTHWDNGDGRGSYSCPQCRQT
FTPRPLLVKNTMLADLVEELKKTGLQTAPAGHCYAGPEDVACDVCTGRKLKALKSCLDCL
ASYCEKHLQPHLQSPPFKKHKLVEPSEKLQENICSRHDEVMKMFCRTDQQCICYLCSVEE
HKDHDTVSAAAERTERQREVGLRRQTIQQRVQDREKDVKLLQQQEEAVNGSADEAVEDSE
KIFTKLIRLLEKRSSDVKQQIRSQQETEVSLVRELQQRLEQEISELKKRKDQDLKQLSDT
EDHNQFLHNYPSLSPLSESTHSSSIRIRPLRTFEDVTAAVSQVRGRLQDILSETETEFLQ
IVSQVDVLLPQPEPKTRADFLKYSQEITLDPNTANKHVLLSEGNSKVTHMRKEQSYSNHP
DRFTVRPQVLSRESLTGHCYWEVELEFGVIGGVGVAVTYKNTSRAGNSDECEFGSNETSW
SLYCHGICYYFYYNRINTPVSGPLSSRVGVYLDHSAGVLSFYSVSDTMTLLHRVQTTFTQ
PLYAGVGIYYPGSTAEFCKLK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcaagaaaatcgactggatagagaaatattctgctgtccgatctgtctggat
ctactgaaggatccggtgactacaggctgtggacacagctactgtaagagctgtatcaac
acccactgggacaatggggatgggagaggaagctacagctgccctcagtgtagacagacc
ttcacaccgaggcctctcctggtgaaaaacaccatgttagcggatttagtggaggagctg
aagaagactggactccaaactgctcctgctggtcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggagaaaactgaaagctctcaagtcctgtttggattgtttg
gcctcttattgtgaaaaacaccttcagcctcatcttcagtcacctccttttaagaagcac
aagctggtggagccctcggagaagctccaggagaacatctgctctcgtcacgatgaggtg
atgaagatgttctgccgcactgatcagcagtgtatctgttatctctgctctgtggaggaa
cataaagaccatgacacggtgtcagctgcagcagaaaggactgagaggcagagagaggtc
gggctgaggagacaaacaatccagcagagagtccaggacagagagaaagatgtgaagctg
cttcaacagcaggaggaggccgtcaatggctctgctgatgaagcagtggaggacagtgag
aagatcttcactaagctgatccgtctgctggagaaaagaagctctgacgtgaagcagcag
atcagatcccagcaggaaaccgaagtgagtctagtcagagagcttcagcagagactggag
caggagatcagtgagctgaagaagaggaaagaccaggacctgaagcagctctcggacaca
gaagatcacaaccagtttctacacaactacccctcactgtcaccactcagtgaatcgaca
cactcatccagcatcaggatccgtcctctgaggacctttgaggacgtgacagcagctgtg
tcccaggtcagaggtcgactacaggacattctgagtgagacagagacagagtttttacag
attgtgtctcaagtggatgtcttactgccacaaccagagccaaagaccagagctgacttc
ttaaaatattcacaggaaatcactcttgatccaaacacagcaaacaaacatgtgttatta
tcagagggcaacagcaaagtgacacatatgagaaaagaacagtcttattctaatcaccca
gacagattcactgttaggcctcaggtcctgagtagagagagtctgactggacattgttac
tgggaggtggagttggagttcggggtgatcggaggagttggtgtagcagtcacatacaag
aataccagcagagcagggaactcagatgaatgtgaatttggatcaaatgaaacatcttgg
tcattatattgtcatggaatctgttattacttttattacaacaggatcaacactccagtg
tcaggtcctctgtcctccagagtaggagtgtacctggatcacagtgcaggggttctgtcc
ttctacagcgtctctgacaccatgactctcctccacagagtccagaccactttcactcag
cctctctatgctggagttgggatttattatcctggatctacagctgagttctgtaaactc
aaatag
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