Pleuronectes platessa (European plaice): 128454759
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Entry
128454759 CDS
T09923
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pplt04121
]
128454759
Ubiquitin system [BR:
pplt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128454759
BRITE hierarchy
Motif
Pfam:
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_2
U-box
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-RING_10
zf-RING_6
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
128454759
NCBI-ProteinID:
XP_053294262
LinkDB
All DBs
Position
13:complement(1736611..1739450)
Genome browser
AA seq
557 aa
AA seq
DB search
MAQREFQLEQETFCCSICLELLKDPVATGCGHSYCKSCINNHWDNGEERGSYSCPQCRQT
FTPRPVLEKNTMLAALVEELKKTGLQAAPADHCYAGPEDVACDVCTGRKLKALKSCLVCL
VSYCEKHLQPHLQSAPLKKHKLVEPSEKLQENICSRHDEVMKMFCRTDQQCICYLCSVEE
HKDHDTVSAAAERTERQRELGLRRQTIQQRVQDTEKDVKLLQQEEEAVNGSADKAVEDSE
EIFTEMIRLLEKRSSDVEQQIRSQQETEVSRVRELQERLEQEITELKRKDHELKQLSDTE
DHNQFLHNYPSLSPLSGSTHSSSIRIRPLRNFEDVTAAVSQVRGRLQDILSETETEILQI
VSQVDVLLPQPETETRADFLRYSQEITLDPNTANKNLLLSEGNRKVTCVRKDQSYSDHPD
RFTYYYQVLSRESLTGRCYWEVEVEVGATVEVAVAYKNISRTGGSRECEFGFNDKSWSLY
CDDDSYIFYYNSIETRVSGPLSSRVGVYLDHSAGVLSFYSVSDTMTLLHRVQTTFTQPLY
AGVYVYTGSTAEFCKLK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggctcagagagaatttcagctggagcaggaaacgttctgctgttcgatctgtctggaa
ctactgaaggatccggtggctactggctgtggacacagctactgtaagagctgtattaac
aaccactgggacaatggggaggagagaggaagctacagctgtcctcagtgtagacagacc
ttcacaccgaggcctgtcctggagaaaaacaccatgttagctgctttagtggaggagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggagaaaactgaaagctctcaagtcctgtttggtttgtttg
gtctcttattgtgaaaaacacctccagcctcatcttcagtcagctccattgaagaagcac
aagctggtggagccctcggagaagctccaggagaacatctgctctcgtcacgacgaggtg
atgaagatgttctgccgcactgatcagcagtgtatctgttatctctgctctgtggaggaa
cataaagaccacgacacagtgtcagctgcagcagaaaggactgagaggcagagagagctc
gggctgaggagacaaacaatccagcagagagtccaggacacagagaaagacgtgaaactg
cttcaacaggaggaggaggccgtcaatggctctgctgataaagcagtggaggacagtgag
gagatcttcactgagatgatccgtctgctggagaaaagaagctctgatgtggagcagcag
atcagatcccagcaggaaactgaagtgagtcgagtcagagagcttcaggagagactggag
caggagatcactgagctgaagaggaaagaccatgaactgaagcagctctcagacacagag
gatcacaaccagtttctacacaactacccctcattgtcaccactcagtggatctacacac
tcatccagcatcaggatccgtcctctgaggaactttgaggacgtgacagcagctgtgtcc
caggtcagaggtcgactacaggacattctgagtgagacagagacagagattttacagatt
gtgtctcaagtggatgttttactgcctcaaccagagacagagaccagagctgacttctta
agatattcacaggaaatcacactagatccaaacacagcaaacaaaaatctgttattatct
gagggaaacagaaaagtaacttgtgtgagaaaagatcagtcttattctgatcacccagac
agattcacttattattatcaggtcctgagtagagagagtctgactggacgttgttactgg
gaggtggaggtggaggtgggagcaacagttgaagtagcagtcgcatacaagaatatcagc
agaacaggaggctcacgtgaatgtgaatttggattcaatgataaatcttggtcattatat
tgtgatgatgacagttatatcttttattacaacagcatcgagactcgagtgtcaggtcct
ctgtcctccagagtaggagtgtacctggatcacagtgcaggtgttctgtccttctacagc
gtctctgacaccatgactctcctccacagagtccagaccacattcactcagcctctctat
gctggagtttatgtttatactggatccacagctgagttctgtaaactcaaatag
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